DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bem46 and W03D8.8

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_491047.2 Gene:W03D8.8 / 189157 WormBaseID:WBGene00020989 Length:430 Species:Caenorhabditis elegans


Alignment Length:369 Identity:62/369 - (16%)
Similarity:120/369 - (32%) Gaps:129/369 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YFYGGYM----------TLALF--AGIILLIFYYAQDLLLYHPDLPANSRIYIPIPTMHNLPHIT 82
            :.||||:          .|.||  :|.::...|..:..:  ||.|         |.|........
 Worm    86 FAYGGYLRCTPPVPFYYLLELFDSSGTLIDSTYIKKHWM--HPKL---------IRTELEEDFCA 139

  Fly    83 VSIKTPDDVTLHAFWVTQPEERSKSSPTLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGY 147
            ...|.|.|...               |.:|...|..|          ||:.|          :|.
 Worm   140 TLFKPPGDGPF---------------PVVLDISGTGG----------GIHEH----------KGA 169

  Fly   148 GLSTGVPTERGLVTDARAAIDYLHTRHDLDHSQLILFGRSLG-------------------GAVV 193
            .|::     .|.|....|...:.:....::...:..|.:::.                   ||.:
 Worm   170 MLAS-----EGFVVLCLAFFQFKYLPQKMEDVDMEYFAKAINYLIDLPFTKNVIGIQGVSFGATI 229

  Fly   194 VDVAADTVYGQKLMCAI-------------VENTFSSIPEMA---VELVHPAVKYIPNLLFKNK- 241
            ||:.. |.:|.|:...:             ::...:.||.::   |.|.|  .::|..::..:: 
 Worm   230 VDLLT-TRHGDKIKALVSINGPQVVSDYLFMQENGAPIPHLSHGQVTLEH--CQFINGVMCSHRN 291

  Fly   242 YHSMSK--IGKCSVPF--------LFISGLADNLVPPRMMRALY-----TKCGSEIK-------R 284
            :..|::  ..:..:|:        :.:.|..|:|..|.:....|     .:.|.:::       .
 Worm   292 FQIMTEKLTPETEIPWERIPSDVKIRVIGSVDDLCQPSVHATYYRQRRLKETGHDVEVELVNGGH 356

  Fly   285 LLEFPGGSHNDTWIVDGYYQAIGGFLAELQQQPLLKAPEKSNVW 328
            ::|.|...|::  :|...||   ||......:.:|.|..:...|
 Worm   357 IMEPPYFPHHE--LVYAKYQ---GFYCGYGGEVVLHAKSQEKTW 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 46/296 (16%)
W03D8.8NP_491047.2 Bile_Hydr_Trans 14..135 CDD:461422 14/59 (24%)
BAAT_C 196..408 CDD:430252 33/208 (16%)

Return to query results.
Submit another query.