DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and RABE1b

DIOPT Version :10

Sequence 1:NP_524752.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_193769.1 Gene:RABE1b / 827784 AraportID:AT4G20360 Length:476 Species:Arabidopsis thaliana


Alignment Length:487 Identity:236/487 - (48%)
Similarity:320/487 - (65%) Gaps:45/487 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAAVCRSTA-----------SMSLALRCSRRAMS---SARMLRMAGATATSTACKDWQRNGLLAA 56
            |.|.|.|::           |:..|:..|.:..:   |:..|.....|.|| |.:..:|:..:.|
plant     5 APAACSSSSRILCSYSSPSPSLCPAISTSGKLKTLTLSSSFLPSYSLTTTS-ASQSTRRSFTVRA 68

  Fly    57 PRTGNMQQYLREYANEKKVFERTKPHCNVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEID 121
            .| |.              |||.|||.|:||||||||||||||||:|..||....:.:|||:|||
plant    69 AR-GK--------------FERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEID 118

  Fly   122 NAPEEKARGITINVAHVEYQTETRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQT 186
            .||||:|||||||.|.|||:||.|||.|.||||||||:||||||.||||||||||:..||.||||
plant   119 AAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 183

  Fly   187 REHMLLAKQIGIDHIVVFINKVDAADE-EMVDLVEMEIRELLTEMGYDGDKIPVVKGSALCALE- 249
            :||:|||||:|:..:|||:||.|..|: |:::|||:|:||||:...::||.||::.||||.|:| 
plant   184 KEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGSALLAVET 248

  Fly   250 -DKSPEIGK------EAILKLLQEVDSFIPTPVRELDKPFLLPVENVYSIPGRGTVVTGRLERGV 307
             .::|::.:      :.|.:|:..||.:||.|.|:.:.||||.||:|:||.|||||.|||:|||.
plant   249 LTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGT 313

  Fly   308 VKKGMECEFVGYNKVLKSTVTGVEMFHQILEEAQAGDQLGALVRGVKRDDIKRGMVMCKPGSVKA 372
            ||.|...:.||..:....||||||||.:||:||.|||.:|.|:||:::.||:||||:.||||:..
plant   314 VKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKPGSITP 378

  Fly   373 LDQLEAQVYILSKDEGGRTKPFMSFIQLQMFSRTWDCAVQVQ--IPDKE----MVMPGEDTKLIL 431
            ..:.||.:|:|.|:||||..||.:..:.|.:.||.|...:|.  :.||:    |||||:..|:::
plant   379 HTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMVMPGDRVKIVV 443

  Fly   432 RLIRPMVLEQGQRFTLRDGNLTLGTGVVTSTL 463
            .||.|:..|||.||.:|:|..|:|.||:.:.|
plant   444 ELIVPVACEQGMRFAIREGGKTVGAGVIGTIL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_524752.1 TufA 73..460 CDD:439820 218/401 (54%)
RABE1bNP_193769.1 PLN03126 17..476 CDD:215592 232/475 (49%)

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