DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and tufm

DIOPT Version :9

Sequence 1:NP_001163144.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001013523.1 Gene:tufm / 541378 ZFINID:ZDB-GENE-050320-73 Length:448 Species:Danio rerio


Alignment Length:465 Identity:290/465 - (62%)
Similarity:355/465 - (76%) Gaps:20/465 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LALRCSRRAMSSARMLRMAGATATSTACKDWQRNGLLAAPRTGNMQQYLREYANE-KKVFERTKP 81
            :|...|.||..||  |::...:...::.|      |.|.|.:      .|.:|.| ||||.|.||
Zfish     1 MAALVSVRACLSA--LQLTSPSLLHSSFK------LCAVPLS------RRNFAAEAKKVFARDKP 51

  Fly    82 HCNVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITINVAHVEYQTETRH 146
            |.|:||||||||||||||||||||||:...|..|.|.:|||||||||||||||.:||||.|..||
Zfish    52 HLNIGTIGHVDHGKTTLTAAITKVLAEAGGANYKSYEDIDNAPEEKARGITINASHVEYTTANRH 116

  Fly   147 YGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQTREHMLLAKQIGIDHIVVFINKVDAA 211
            |.||||||||||:||||||||||||.|||||||||.|||||||:|||:|||:.|:||:|||.||.
Zfish   117 YAHTDCPGHADYVKNMITGTAQMDGCILVVAATDGQMPQTREHLLLARQIGVQHVVVYINKADAV 181

  Fly   212 DE-EMVDLVEMEIRELLTEMGYDGDKIPVVKGSALCALEDKSPEIGKEAILKLLQEVDSFIPTPV 275
            |: ||:||||:||||||||.||||:..|||.||||||||:|.||:|..:|:|||:.:|..||.|.
Zfish   182 DDKEMLDLVELEIRELLTEFGYDGENTPVVVGSALCALENKKPELGVNSIMKLLEVIDGHIPLPS 246

  Fly   276 RELDKPFLLPVENVYSIPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQILEEA 340
            |:||||||:||:.|||||||||||:|.|||||:|||.||||:|:|:..||.:||:||||:.|:.|
Zfish   247 RDLDKPFLMPVDGVYSIPGRGTVVSGTLERGVIKKGDECEFLGHNRCFKSIITGIEMFHKSLDRA 311

  Fly   341 QAGDQLGALVRGVKRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFMSFIQLQMFSR 405
            :|||.:|||:||:||:|::|||||.||||::...::.||||||||:||||.|||.:.....|||.
Zfish   312 EAGDNMGALIRGLKREDVRRGMVMIKPGSIQPHQKIRAQVYILSKEEGGRHKPFFTNFTPIMFSL 376

  Fly   406 TWDCAVQVQ-IPDKEMVMPGEDTKLILRLIRPMVLEQGQRFTLRDGNLTLGTGVVTSTLPPLTES 469
            |||.|..|: :|.||||||||||.:.|.|.:||.|::||||||||||.|:|||:||..   ||.:
Zfish   377 TWDMACIVELLPGKEMVMPGEDTAVNLILRQPMALDKGQRFTLRDGNQTIGTGLVTDI---LTIT 438

  Fly   470 QRSELTEGKK 479
            :..:.|.|:|
Zfish   439 KDDKYTWGEK 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_001163144.1 PRK00049 73..463 CDD:234596 271/391 (69%)
EF_Tu 81..274 CDD:206671 144/193 (75%)
EFTU_II 282..368 CDD:293898 57/85 (67%)
mtEFTU_III 371..462 CDD:294005 55/91 (60%)
tufmNP_001013523.1 PRK00049 42..435 CDD:234596 271/395 (69%)
EF_Tu 51..245 CDD:206671 144/193 (75%)
EFTU_II 253..339 CDD:293898 57/85 (67%)
mtEFTU_III 342..434 CDD:294005 55/91 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594800
Domainoid 1 1.000 302 1.000 Domainoid score I1374
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2490
Inparanoid 1 1.050 562 1.000 Inparanoid score I1054
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D298219at33208
OrthoFinder 1 1.000 - - FOG0002097
OrthoInspector 1 1.000 - - oto41287
orthoMCL 1 0.900 - - OOG6_100780
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R370
SonicParanoid 1 1.000 - - X2038
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.930

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