DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and CG4849

DIOPT Version :10

Sequence 1:NP_524752.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster


Alignment Length:468 Identity:102/468 - (21%)
Similarity:168/468 - (35%) Gaps:120/468 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NVGTIGHVDHGKTT-LTAAITKVLADKQLAESKKYNEIDNAPEEKARGITIN---VAHVEYQTET 144
            ||..:||:.||||| :...|.:.....:..|.::....|....|:.||.:|.   |..|....:.
  Fly   133 NVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDVKQ 197

  Fly   145 RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQTR---EHMLLAKQIGIDHIVVF 204
            :.|  ...|.|||.::...........||.:|.:.|.:|.|..|.   :|.:..:|.    |.|.
  Fly   198 KSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQA----ITVC 258

  Fly   205 INKVDA-----------ADEEMVDLVEMEIRELLTEMGYDGDKIPVVKGSALCALEDKSPEIGK- 257
            |||:|.           |..::..:|| |:..||:..|...|.:.|            ||.:|. 
  Fly   259 INKIDRLILELKLPPQDAYFKLKHIVE-EVNGLLSTYGAPDDNLLV------------SPILGNV 310

  Fly   258 -------------EAILKLLQEV---------------DSFIPTPVRELDK------------PF 282
                         ::..||..:.               |.:..:..|:..|            .|
  Fly   311 CFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEF 375

  Fly   283 LLPVENVYSIPGR--GTVVT------GRLERGVVKKGMECEFVGYNKVLKSTVTG---------V 330
            :|  |.:|.:..:  |.|.|      ..|...|.|:.|:.......:::.:...|         |
  Fly   376 IL--EPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCV 438

  Fly   331 EMFHQILEEAQAGDQLGALVRGVKRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFM 395
            |.....||.|:.  ::..:..|.|..||.|.|:.|  .....|....:::|  ..|:       .
  Fly   439 EHIKSPLENAKR--KVDHIYTGPKEGDIYRDMISC--NQYGTLMVHSSKMY--PNDD-------C 490

  Fly   396 SFIQL--QMFSRTWDCAVQVQIPDKEMVMPGEDTKLILRLIRPMVLEQGQRFTLR---DGNLTLG 455
            :|.|:  ::.|.|.....:|::..:...:..|:...||::.|..|.|...:..|.   .||..|.
  Fly   491 TFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRYKVELNRVPAGNWVLI 555

  Fly   456 TG-----VVTSTL 463
            .|     |.|||:
  Fly   556 EGIDQCIVKTSTI 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_524752.1 TufA 73..460 CDD:439820 99/463 (21%)
CG4849NP_651605.1 EFTUD2 4..111 CDD:464968
PRK13351 115..957 CDD:481252 102/468 (22%)
Blue background indicates that the domain is not in the aligned region.

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