DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and tuf1

DIOPT Version :10

Sequence 1:NP_524752.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_595746.1 Gene:tuf1 / 2540210 PomBaseID:SPBC9B6.04C Length:439 Species:Schizosaccharomyces pombe


Alignment Length:439 Identity:247/439 - (56%)
Similarity:320/439 - (72%) Gaps:11/439 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 MAGATATSTACKDWQRNGL------LAAPRTGNMQQYLREYANEKKVFERTKPHCNVGTIGHVDH 93
            |..|.|||...:.:::|.|      .|:..........|.||:| |||.|.|||.|:||||||||
pombe     1 MNSAKATSLLFQGFRKNCLRLNRISFASGLINRFTVPARTYADE-KVFVRKKPHVNIGTIGHVDH 64

  Fly    94 GKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITINVAHVEYQTETRHYGHTDCPGHADY 158
            |||||||||||.|:|...|....|::||.|||||||||||:.|||||:|..|||.|.||||||||
pombe    65 GKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADY 129

  Fly   159 IKNMITGTAQMDGAILVVAATDGAMPQTREHMLLAKQIGIDHIVVFINKVDAADEEMVDLVEMEI 223
            |||||||.|.|||||:||:||||.|||||||:|||:|:|:..|||:|||||..:.:|::|||||:
pombe   130 IKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEM 194

  Fly   224 RELLTEMGYDGDKIPVVKGSALCALEDKSPEIGKEAILKLLQEVDSFIPTPVRELDKPFLLPVEN 288
            ||||:|.|:|||..|:|.||||||||.:.||||..:|.||::.|||:|..|.|:.|.|||:.:|:
pombe   195 RELLSEYGFDGDNTPIVSGSALCALEGREPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIED 259

  Fly   289 VYSIPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQILEEAQAGDQLGALVRGV 353
            |:||.|||||||||:|||.:|||.|.|.|||...||:||||:|||.:.|:.|.|||..|.|:|.:
pombe   260 VFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSHLKTTVTGIEMFKKQLDAAVAGDNCGLLLRSI 324

  Fly   354 KRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFMSFIQLQMFSRTWDCAVQVQIPD- 417
            ||:.:||||::.:||:|....:.:|..|||:|:||||...|:...:.|::|||.|..|::..|| 
pombe   325 KREQLKRGMIVAQPGTVAPHQKFKASFYILTKEEGGRRTGFVDKYRPQLYSRTSDVTVELTHPDP 389

  Fly   418 ---KEMVMPGEDTKLILRLIRPMVLEQGQRFTLRDGNLTLGTGVVTSTL 463
               .:|||||::.::|..||.|:|:|:|||||:|:|..|:||.:||..|
pombe   390 NDSDKMVMPGDNVEMICTLIHPIVIEKGQRFTVREGGSTVGTALVTELL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_524752.1 TufA 73..460 CDD:439820 232/390 (59%)
tuf1NP_595746.1 PRK00049 42..439 CDD:234596 237/398 (60%)

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