DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and tuf1

DIOPT Version :9

Sequence 1:NP_001163144.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_595746.1 Gene:tuf1 / 2540210 PomBaseID:SPBC9B6.04c Length:439 Species:Schizosaccharomyces pombe


Alignment Length:439 Identity:247/439 - (56%)
Similarity:320/439 - (72%) Gaps:11/439 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 MAGATATSTACKDWQRNGL------LAAPRTGNMQQYLREYANEKKVFERTKPHCNVGTIGHVDH 93
            |..|.|||...:.:::|.|      .|:..........|.||:| |||.|.|||.|:||||||||
pombe     1 MNSAKATSLLFQGFRKNCLRLNRISFASGLINRFTVPARTYADE-KVFVRKKPHVNIGTIGHVDH 64

  Fly    94 GKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITINVAHVEYQTETRHYGHTDCPGHADY 158
            |||||||||||.|:|...|....|::||.|||||||||||:.|||||:|..|||.|.||||||||
pombe    65 GKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADY 129

  Fly   159 IKNMITGTAQMDGAILVVAATDGAMPQTREHMLLAKQIGIDHIVVFINKVDAADEEMVDLVEMEI 223
            |||||||.|.|||||:||:||||.|||||||:|||:|:|:..|||:|||||..:.:|::|||||:
pombe   130 IKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEM 194

  Fly   224 RELLTEMGYDGDKIPVVKGSALCALEDKSPEIGKEAILKLLQEVDSFIPTPVRELDKPFLLPVEN 288
            ||||:|.|:|||..|:|.||||||||.:.||||..:|.||::.|||:|..|.|:.|.|||:.:|:
pombe   195 RELLSEYGFDGDNTPIVSGSALCALEGREPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIED 259

  Fly   289 VYSIPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQILEEAQAGDQLGALVRGV 353
            |:||.|||||||||:|||.:|||.|.|.|||...||:||||:|||.:.|:.|.|||..|.|:|.:
pombe   260 VFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSHLKTTVTGIEMFKKQLDAAVAGDNCGLLLRSI 324

  Fly   354 KRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFMSFIQLQMFSRTWDCAVQVQIPD- 417
            ||:.:||||::.:||:|....:.:|..|||:|:||||...|:...:.|::|||.|..|::..|| 
pombe   325 KREQLKRGMIVAQPGTVAPHQKFKASFYILTKEEGGRRTGFVDKYRPQLYSRTSDVTVELTHPDP 389

  Fly   418 ---KEMVMPGEDTKLILRLIRPMVLEQGQRFTLRDGNLTLGTGVVTSTL 463
               .:|||||::.::|..||.|:|:|:|||||:|:|..|:||.:||..|
pombe   390 NDSDKMVMPGDNVEMICTLIHPIVIEKGQRFTVREGGSTVGTALVTELL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_001163144.1 PRK00049 73..463 CDD:234596 234/393 (60%)
EF_Tu 81..274 CDD:206671 132/192 (69%)
EFTU_II 282..368 CDD:293898 49/85 (58%)
mtEFTU_III 371..462 CDD:294005 41/94 (44%)
tuf1NP_595746.1 PRK00049 42..439 CDD:234596 237/398 (60%)
EF_Tu 52..245 CDD:206671 132/192 (69%)
EFTU_II 253..339 CDD:293898 49/85 (58%)
EFTU_III 343..434 CDD:294006 39/90 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 282 1.000 Domainoid score I296
eggNOG 1 0.900 - - E1_COG0050
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2490
Inparanoid 1 1.050 484 1.000 Inparanoid score I262
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002097
OrthoInspector 1 1.000 - - oto102056
orthoMCL 1 0.900 - - OOG6_100780
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R370
SonicParanoid 1 1.000 - - X2038
TreeFam 1 0.960 - -
1211.850

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