DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and HBS1

DIOPT Version :10

Sequence 1:NP_524752.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster


Alignment Length:464 Identity:119/464 - (25%)
Similarity:202/464 - (43%) Gaps:97/464 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QQYLREYANEKKVFERTKPHCNVGTIGHVDHGKTTL-------TAAITKVLADKQLAESKKYNE- 119
            |.|.:|.|::|.       |.::..|||||.||:||       |..:::.:..|...||||..: 
  Fly   235 QLYEKERADQKS-------HIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQ 292

  Fly   120 -------IDNAPEEKARGITINVAHVEYQTETRHYGHTDCPGHADYIKNMITGTAQMDGAILVVA 177
                   :|...||:|||||::|.....:|:|:.....|.|||.|:|.|||:|..|.|.|:|||.
  Fly   293 SFMYAWVLDETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVD 357

  Fly   178 ATDGAMP-------QTREHMLLAKQIGIDHIVVFINKVDA---ADEEMVDLVEMEIRELLTEMGY 232
            ||.|...       |||||.:|.:.:|::.:.|.|||:|.   :.:...::| .:::..|...|:
  Fly   358 ATRGEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTVGWSQDRFTEIV-TKLKSFLKLAGF 421

  Fly   233 DGDKIPVVKGSALCALEDKSPEIGKEAILK------LLQEVDSFIPTPVRELDKPFLLPVENVYS 291
            ....:.....|.|.. |:.:.:..:.|:..      ||..:::| ..|.|.:|:|..:.|.::|.
  Fly   422 KDSDVSFTPCSGLTG-ENLTKKAQEPALTNWYSGRHLLDVIENF-KIPERAIDRPLRMSVSDIYK 484

  Fly   292 IPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQILEEAQ--------------- 341
            ..|.|..::||:|.||:...        :|||    .|...     |:||               
  Fly   485 GTGSGFCISGRVETGVLCLN--------DKVL----VGASR-----EQAQVKSLTMNEFPQTCVF 532

  Fly   342 AGDQLGALVRGVKRDDIKRGMVMCKPGS-VKALDQLEAQVYILSKDEGGRTKPFMSFIQLQMFSR 405
            ||||:...:..:..:::..|.::..|.: :....:.:|::.:.:.    :....|.|..|.....
  Fly   533 AGDQVSVTLPALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNV----KVPITMGFPVLLHHQS 593

  Fly   406 TWDCAVQVQIPDKEMVMPGEDTK-------------LILRLIRPMVLEQGQ------RFTLRDGN 451
            ..:.||..::........||..|             :.|...||:.:|:..      |..||...
  Fly   594 LIEPAVVCKLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAG 658

  Fly   452 LTLGTGVVT 460
            :|:..|:||
  Fly   659 VTIAAGMVT 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_524752.1 TufA 73..460 CDD:439820 113/452 (25%)
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642
TEF1 242..669 CDD:444074 116/457 (25%)
Blue background indicates that the domain is not in the aligned region.

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