Protein Alignment Rpp30 and rpp30

DIOPT Version :10

• Sequence 1: NP_524749.1
• Gene: Rpp30 / 44392
• FlyBaseID: FBgn0283652
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_001016584.1
• Gene: rpp30 / 549338
• XenbaseID: XB-GENE-993926
• Length: 265
• Species: Xenopus tropicalis
• Alignment Length: 247
• Identity: 81/247 - (32%)
• Similarity: 125/247 - (50%)
• Gaps: 15/247 - (6%)

  Fly     7 FYDFSIPYNKDDSVLRALLNELVETGYKTVAIDQ--SFDHSKKDPGKRGS--EMFPEPHKIEHLR 67
            |.|.:|...||...|:.::......||.||||:.  .|:..|.:.||..|  |:|.....:
 Frog     4 FVDLNITNCKDVKKLQNMIEMAAHLGYSTVAINHVFEFESKKMEIGKPISTKELFSTLPTV---- 64

  Fly    68 KEFQDK---LRILQRITILYVDVNVAHAM-SVSHNLRKFNLIAGQPKTDAALTHCCTAFNGDLIT 128
               |.|   ::||.|:||:..|.:..:.: |.|.:.|.::::|..|||:......||:.:.|||.
 Frog    65 ---QGKSIPIKILTRLTIIASDPSHCNVLRSTSPSTRLYDIVAVFPKTEKLFHAACTSIDVDLIC 126

  Fly   129 FDPVAGSRLLVNRKAYQVAVRRGMFFEIKYAPSICDSNNRKDMIKIAQNYCTKGKSKNVIFSSGA 193
            .:....:.....|.....|::||:|||:.|.|:|.||..|:..|..|.:.....|.||:|.||||
 Frog   127 INVTEKAPFFFRRPPINAAIQRGIFFELVYTPAIKDSTLRRYTISNALSLMQVCKGKNIIISSGA 191

  Fly   194 AHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRELFLKAEARRLGKTIMF 245
            ....::|||||:|.|..:|||:|...|.||..:||...|..|.|:....:::
 Frog   192 ERALEMRGPYDIATLGLLFGLTEGVAKAAVSTNCRSAVLHGETRKTAFGVVY 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp30	NP_524749.1	RNase_P_p30	8..226	CDD:396447	75/225 (33%)
rpp30	NP_001016584.1	RNase_P_p30	5..224	CDD:396447	75/225 (33%)