Protein Alignment Rpp30 and rpp30

DIOPT Version :9

• Sequence 1: NP_001259808.1
• Gene: Rpp30 / 44392
• FlyBaseID: FBgn0283652
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_001016584.1
• Gene: rpp30 / 549338
• XenbaseID: XB-GENE-993926
• Length: 265
• Species: Xenopus tropicalis
• Alignment Length: 247
• Identity: 81/247 - (32%)
• Similarity: 125/247 - (50%)
• Gaps: 15/247 - (6%)

  Fly     7 FYDFSIPYNKDDSVLRALLNELVETGYKTVAIDQ--SFDHSKKDPGKRGS--EMFPEPHKIEHLR 67
            |.|.:|...||...|:.::......||.||||:.  .|:..|.:.||..|  |:|.....:
 Frog     4 FVDLNITNCKDVKKLQNMIEMAAHLGYSTVAINHVFEFESKKMEIGKPISTKELFSTLPTV---- 64

  Fly    68 KEFQDK---LRILQRITILYVDVNVAHAM-SVSHNLRKFNLIAGQPKTDAALTHCCTAFNGDLIT 128
               |.|   ::||.|:||:..|.:..:.: |.|.:.|.::::|..|||:......||:.:.|||.
 Frog    65 ---QGKSIPIKILTRLTIIASDPSHCNVLRSTSPSTRLYDIVAVFPKTEKLFHAACTSIDVDLIC 126

  Fly   129 FDPVAGSRLLVNRKAYQVAVRRGMFFEIKYAPSICDSNNRKDMIKIAQNYCTKGKSKNVIFSSGA 193
            .:....:.....|.....|::||:|||:.|.|:|.||..|:..|..|.:.....|.||:|.||||
 Frog   127 INVTEKAPFFFRRPPINAAIQRGIFFELVYTPAIKDSTLRRYTISNALSLMQVCKGKNIIISSGA 191

  Fly   194 AHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRELFLKAEARRLGKTIMF 245
            ....::|||||:|.|..:|||:|...|.||..:||...|..|.|:....:::
 Frog   192 ERALEMRGPYDIATLGLLFGLTEGVAKAAVSTNCRSAVLHGETRKTAFGVVY 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp30	NP_001259808.1	RNase_P_p30	8..226	CDD:280117	75/225 (33%)
rpp30	NP_001016584.1	RNase_P_p30	5..223	CDD:376638	75/224 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	109	1.000	Domainoid score	I6304
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H38180
Inparanoid	1	1.050	121	1.000	Inparanoid score	I4614
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004460
OrthoInspector	1	1.000	-	-		oto104680
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1168
SonicParanoid	1	1.000	-	-		X4844
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.080