DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and YPT31

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_010948.1 Gene:YPT31 / 856753 SGDID:S000000833 Length:223 Species:Saccharomyces cerevisiae


Alignment Length:181 Identity:72/181 - (39%)
Similarity:119/181 - (65%) Gaps:6/181 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|:::||:||||||:|:.||.:|:|:.:...|||::|.::.:::||...|..:|||||.||:
Yeast    11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERY 75

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.::||.|:||::||||:...|......||:||...:|: |:|:.::|||.|  ..|.|..|
Yeast    76 RAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADD-NVAVGLIGNKSDLAHLRAVPTE 139

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI---VSSEYFNNGNASA 178
            |.:.||::::.||.||||...:.|...|::::..|   ||....:.|::||
Yeast   140 ESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 65/160 (41%)
YPT31NP_010948.1 Rab11_like 11..175 CDD:206660 66/164 (40%)

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