DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB13

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_002861.1 Gene:RAB13 / 5872 HGNCID:9762 Length:203 Species:Homo sapiens


Alignment Length:187 Identity:74/187 - (39%)
Similarity:109/187 - (58%) Gaps:10/187 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.||.||.|:.|:..:..|||:|||.:.:.::|...|:.:|||||.|||
Human     6 DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAI--IVVGNKIDEE--RVVD 128
            :::|.::||.|:|.|||||||...|...::.|   :.|..:|.:..:  :::|||.|.|  |.|.
Human    71 KTITTAYYRGAMGIILVYDITDEKSFENIQNW---MKSIKENASAGVERLLLGNKCDMEAKRKVQ 132

  Fly   129 REEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIV---SSEYFNNGNASAGLDI 182
            :|:..|.||:|...|.|||||....|.:.|..:...|:   ......|||.....|:
Human   133 KEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 68/162 (42%)
RAB13NP_002861.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 70/168 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 9/16 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 4/17 (24%)

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