DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab18

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001017281.1 Gene:rab18 / 550035 XenbaseID:XB-GENE-489852 Length:206 Species:Xenopus tropicalis


Alignment Length:201 Identity:102/201 - (50%)
Similarity:130/201 - (64%) Gaps:15/201 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSL 70
            :|:|:|||||||||||:.||.::.||.....|||:|||.|.:.|||...|:|:|||||.||||:|
 Frog     9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTL 73

  Fly    71 TPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEE-RVVDREEGRK 134
            |||:||.|.|.|||||:|.||:..:|:.||.||::|....:|..::||||||:| |.|||.||.|
 Frog    74 TPSYYRGAQGVILVYDVTRRDTFTRLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLK 138

  Fly   135 FARKHRALFIETSAKCDQFVSDVFKDVVEKIV------SSEYFNNGNASAGLDIASDRDLEASAS 193
            |||||..||||.|||....|...|:::||||:      .||..|.|..      .|:.|......
 Frog   139 FARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESETNNRGVR------LSNEDGGGRGG 197

  Fly   194 TC--YC 197
            :|  ||
 Frog   198 SCSGYC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 91/159 (57%)
rab18NP_001017281.1 Rab18 9..169 CDD:206656 91/159 (57%)

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