DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab10

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:195 Identity:72/195 - (36%)
Similarity:117/195 - (60%) Gaps:4/195 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.::.||.::.|:.....|||:|||.|.:::.|...|:.:|||||.|||
Zfish     7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            .::|.|:||.|:|.:||||||:..|...:..||..:|.:: |.::..:::|||.|  ::|||.:.
Zfish    72 HTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMEDKRVVPKA 135

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIASDRDLEASASTC 195
            :|.:.|::|...|.|||||.:..:...|..:.|.|:........| |..:||::...:....:.|
Zfish   136 KGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPN-SENVDISTGGGVTGWKTKC 199

  Fly   196  195
            Zfish   200  199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 65/160 (41%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 67/166 (40%)

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