DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab8

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:177 Identity:65/177 - (36%)
Similarity:107/177 - (60%) Gaps:7/177 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.::.||.|:.|:.....|||:|||.:.:::|....|:.:|||||.|||
  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNK--IDEERVVDRE 130
            |::|.::||.|:|.:||||||...|...::.|:..::. :.:.::..:::|||  :.::|.|.:|
  Fly    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEE-NASADVEKMLLGNKCELTDKRQVSKE 134

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSEYFNN 173
            .|.:.|.::...|:|||||....|.:.|    .|:..|.......||
  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 61/164 (37%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 62/166 (37%)

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