DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab19

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster


Alignment Length:199 Identity:75/199 - (37%)
Similarity:117/199 - (58%) Gaps:7/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|:::||:.|.||:.::.||....:.:.|..|||:||..|.:.|:|...|:.:|||||.|||
  Fly    19 DFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERF 83

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.|:||.|.|.::|||||.|.|...|:.|:.|:..|:.: |:.||:||||.|  |:|.||.|
  Fly    84 RTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTAS-NVLIILVGNKCDLEEQREVDFE 147

  Fly   131 EGRKFARK-HRALFI-ETSAKCDQFVSDVFKDVVEKIVSSEYFNNGN--ASAGLDIASDRDLEAS 191
            |.|:..:. ...||: |||||.:..|.|.|:.:..::......||..  ....:.:...:.|::.
  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLKSC 212

  Fly   192 ASTC 195
            :|:|
  Fly   213 SSSC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 69/162 (43%)
Rab19NP_523970.1 Rab19 19..184 CDD:133267 70/165 (42%)

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