DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and CG15399

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_608712.1 Gene:CG15399 / 33472 FlyBaseID:FBgn0031460 Length:242 Species:Drosophila melanogaster


Alignment Length:206 Identity:44/206 - (21%)
Similarity:70/206 - (33%) Gaps:73/206 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDV-TIGMDFKSKVMQVDGIDYK-------VALWDTA 62
            :::|::|:.||||:||.......:.....|. |:|.:  |..:||...:|.       ...|.|.
  Fly    12 VRILMLGDRGVGKTSLTNLMATTEITPTPDSRTVGEE--SWHVQVRLHEYSKPVILPPTPTWTTP 74

  Fly    63 GAER------FRSLTP--------------------------SFYRKALGAILVYDITSRDSLVK 95
            .:..      :...||                          |||:...|.:|||::....|...
  Fly    75 SSSEDSENYPYMRSTPTTTNILYFVEFYDLNSDWRMCRQQRESFYKNIDGIVLVYNMLELSSQDS 139

  Fly    96 LETWLAE------------LDSYSDNPNIAIIVVGNKID-------------------EERVVDR 129
            |..||.:            :.|...|.|..|:|||..:|                   ||.:|:.
  Fly   140 LHDWLYDPLRQICKHRHLRIRSILKNHNAPILVVGTNLDKLMRRPLRRRGSIAHQLNVEEMLVNC 204

  Fly   130 EEGRKFARKHR 140
            .:.:.|..|.|
  Fly   205 LDPQSFVDKSR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 44/206 (21%)
CG15399NP_608712.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..229 CDD:476819 44/206 (21%)

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