DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab9E

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster


Alignment Length:169 Identity:58/169 - (34%)
Similarity:94/169 - (55%) Gaps:9/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVA----LWDTAG 63
            |...|::::|:|||||:.|:.||.:|:|...|..|:|||  .:...|:..|:::.    :|||:.
  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMD--RRECSVEFADWRMGRMLQVWDTSD 67

  Fly    64 AERFRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE--ERV 126
            .|||:.|..:..|.|.|.:|||||||..|...::.|:.|:.....: .:.:::||||.|:  .|.
  Fly    68 DERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPD-KVIVLLVGNKSDDPNHRQ 131

  Fly   127 VDREEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI 165
            |...:|..:|.:....|.|.|||..:.|.|:|..:...|
  Fly   132 VSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 56/164 (34%)
Rab9ENP_727438.1 Rab 8..167 CDD:206640 56/161 (35%)

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