DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab12

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_077768.3 Gene:Rab12 / 19328 MGIID:894284 Length:291 Species:Mus musculus


Alignment Length:168 Identity:65/168 - (38%)
Similarity:111/168 - (66%) Gaps:4/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAER 66
            ||..:::::||..||||:||:.||.::.|.:....|:|:|||.|.:::.|...::.:|||||.||
Mouse    86 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQER 150

  Fly    67 FRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDR 129
            |.|:|.::||.|.|.|||||||.:::...|..|:..:|.|: :.:..:::||||:|  .:|.:.|
Mouse   151 FNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYA-SEDAELLLVGNKLDCETDREISR 214

  Fly   130 EEGRKFARKHRAL-FIETSAKCDQFVSDVFKDVVEKIV 166
            ::|.|||::...: |.|.|||.:..|.::|..:|:.|:
Mouse   215 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 62/161 (39%)
Rab12NP_077768.3 Rab12 90..291 CDD:206699 63/164 (38%)

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