DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab4

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:Rab4 / 1274041 VectorBaseID:AGAMI1_000885 Length:224 Species:Anopheles gambiae


Alignment Length:173 Identity:77/173 - (44%)
Similarity:112/173 - (64%) Gaps:7/173 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|.|:||.:|.|||.|:..|:||||.::...|||::|.|:::.|.|...|:.:|||||.|||
Mosquito     6 DYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNK--IDEERVVDRE 130
            ||:|.|:||.|.||:||||.|||||...|..||.:..:.: :.||.|::||||  ::|:|.|...
Mosquito    71 RSVTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLA-SQNICILLVGNKKDLEEDREVTFL 134

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSE 169
            |...||:::..:|:|||||..:.|.:.|    |.::.||.:.|
Mosquito   135 EASNFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 73/164 (45%)
Rab4XP_313105.2 Rab4 9..169 CDD:206696 73/160 (46%)

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