DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Frk

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_077344.1 Gene:Frk / 79209 RGDID:621423 Length:506 Species:Rattus norvegicus


Alignment Length:360 Identity:114/360 - (31%)
Similarity:184/360 - (51%) Gaps:44/360 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 LSLLDQ-QIKAPAVARLNSLG------PNASTESEMASY-----------LHRKC----SGTPST 642
            ||:||: .:|...:.||:..|      ...||.:|..:|           |.:.|    ..||..
  Rat   155 LSVLDEGVVKHYRIRRLDEGGFFLTRRKTFSTLNEFVNYYTTTSDGLCVKLEKPCLKIQVPTPFD 219

  Fly   643 PSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSG-WLLRKSGAGEESRLEVAIKMLSDEHSN 706
            .|...|:    ::.|:...:.|.:.:|.|:||.|..| |         .:...||:|.|.....:
  Rat   220 LSYKTVD----QWEIDRNSIQLLKRLGSGQFGEVWEGLW---------NNTTPVAVKTLKPGSMD 271

  Fly   707 KQEFLREASVMMRLEHKCIVRLIGIAKGE-MLMMVQELAPLGSMLQYIL-DHGHEITANAELKVW 769
            ..:|||||.:|..|.|..:::|..:...| .:.::.||...||:.:|:. |.|.:|....::.: 
  Rat   272 PNDFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIRLTQQVDM- 335

  Fly   770 ASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTE-YQFTQGGRWPIRW 833
            |:|:|.||.|||||:::||||||||:|:...:..|::|||::|..:..:.: |:.....:.|::|
  Rat   336 AAQVASGMAYLESQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKW 400

  Fly   834 YAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYA 898
            .|||:.....||..|||||||:.::|:.:.|..||..::....|.::....|||||:.||...|:
  Rat   401 TAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIHMLGQNYRLPQPSNCPEQFYS 465

  Fly   899 VMQSCWKERPKDRPTFV----YLTEFFARDPDYQN 929
            :|..||...||.||||.    .|.::|..|..|.:
  Rat   466 IMMECWNVEPKQRPTFETLHWKLEDYFEPDSSYSD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 93/267 (35%)
FrkNP_077344.1 SH3_Src_like 48..105 CDD:212779
SH2_Src_Frk 113..208 CDD:199831 13/52 (25%)
PTKc_Frk_like 226..495 CDD:270653 94/282 (33%)
Blue background indicates that the domain is not in the aligned region.

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