DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and nck2

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001007985.1 Gene:nck2 / 493349 XenbaseID:XB-GENE-6083355 Length:381 Species:Xenopus tropicalis


Alignment Length:110 Identity:29/110 - (26%)
Similarity:52/110 - (47%) Gaps:24/110 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFSIDD 74
            ||:|.::|..|:..|.:...:|.|::|:|.::..||.:||...|:..|::|:.   .|:.:.|..
 Frog   286 WYYGGITRHQAECALNERGMEGDFVIRDSESSPSDFSISLKASGKNKHFKVQL---VDSVYCIGQ 347

  Fly    75 KVQTKILHGLDTLVDYYQQAANGLPTKLTVPLIRDLPPHNTRSHG 119
                :....||.||::|::|                 |..|..||
 Frog   348 ----RRFKNLDELVEHYKKA-----------------PIFTSEHG 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 23/80 (29%)
ANKYR <94..317 CDD:440430 5/26 (19%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650
nck2NP_001007985.1 SH3_Nck2_1 2..59 CDD:212832
SH3_Nck2_2 115..169 CDD:212835
SH3_Nck2_3 199..257 CDD:212836
SH2 284..381 CDD:472789 29/110 (26%)
Blue background indicates that the domain is not in the aligned region.

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