DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Tnk1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_006246766.1 Gene:Tnk1 / 303247 RGDID:1310113 Length:740 Species:Rattus norvegicus


Alignment Length:555 Identity:167/555 - (30%)
Similarity:222/555 - (40%) Gaps:152/555 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 ASPATPPT----------PVSPHSHHQHPHVPALTITKKKQKENSSSMFNTLRLTSPKKALFDMN 481
            |.|..||.          ||| .:....|.||...            .|....|..|:..||...
  Rat     4 AQPGRPPLSATREFDCSGPVS-RTRPPQPGVPPFL------------GFIARHLGGPRSCLFRFR 55

  Fly   482 S---------LRKNKSKGKRSDSESSVSGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVTGS 537
            .         ||:..:.....::.|.....|....|..|...|:|:.|:.:..            
  Rat    56 QAIHLKQTAVLRRGLTPDMLPEASSLWLLRLLRDVQLAQFYRPILEELNVTRP------------ 108

  Fly   538 GAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAG----QWIGNGYQPTMD 598
                  |.::..|......:.:...||:...|         |::|.|:|    .|:         
  Rat   109 ------EHFDFVRPEDLDNLGMGRPAQRRLTE---------ALKRYRSGVKSKNWV--------- 149

  Fly   599 VLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGTPSTPSATEVEAAKLRFFIEPEKLV 663
                            ...||..|..:.|:..|       :.|.|...|.|.. |:..| ||..|
  Rat   150 ----------------YKILGGFAPEQKEIPPY-------SDSLPHLHEPEGG-LKCLI-PEGAV 189

  Fly   664 LDRE-IGHGEFGSVHSG-WLLRKSGAGEESRLEVAIKML-----SDEHSNKQEFLREASVMMRLE 721
            ...| :|.|.||.||.| |.|    .|.:| :.||:|.|     ....:...:||||.||||:||
  Rat   190 CRGELLGSGCFGVVHQGLWTL----PGGQS-IPVAVKSLRVGPEGPMGTELGDFLREVSVMMKLE 249

  Fly   722 HKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAE--------LKVWASQIACGMH 778
            |..::||.|:..|:.|.||.|||||||:      |. .:||.|.        |.::..|:|..|.
  Rat   250 HPHVLRLHGLVLGQPLQMVMELAPLGSL------HA-RLTAPAPMPPLPVTLLCLFLRQLAGAMA 307

  Fly   779 YLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPI--RWYAPESFNL 841
            ||.|...||||||.||:||.:..:.|::|||:.|.|  |....::..||..||  .|.||||...
  Rat   308 YLGSCGLVHRDLATRNLLLASPRKIKVADFGLVRPL--GGARGRYVMGGPRPIPYAWCAPESLRQ 370

  Fly   842 GIFSHASDVWSFGVTIWEMFS------LGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVM 900
            |.||.|||||.||||:|||||      .|.|||..:.     :|.....|||:|.||...:|::.
  Rat   371 GAFSAASDVWMFGVTLWEMFSGGEEPWAGVPPYLILQ-----RLEKDRARLPKPALCSRALYSLA 430

  Fly   901 QSCWKERPKDRPTFVYLTEFFARDPDYQNLPELVQ 935
            ..||...|.|||||             .||..|:|
  Rat   431 LRCWAPHPADRPTF-------------SNLEGLLQ 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 115/282 (41%)
Tnk1XP_006246766.1 SAM_TNK-like 89..140 CDD:188938 12/77 (16%)
Protein Kinases, catalytic domain 193..453 CDD:473864 119/292 (41%)
SH3 <468..509 CDD:473055
UBA_like_SF 668..711 CDD:473871
UBA_like_SF 698..737 CDD:473871
Blue background indicates that the domain is not in the aligned region.

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