DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and old-1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_496130.2 Gene:old-1 / 191737 WormBaseID:WBGene00003862 Length:502 Species:Caenorhabditis elegans


Alignment Length:379 Identity:126/379 - (33%)
Similarity:180/379 - (47%) Gaps:68/379 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 DQQIKAPAVA---RLNSLG---------PNASTESEMASYLHRKCSGTPSTPS----ATEVEAAK 652
            |:.:..|..|   |.||..         |..|.||::..        |||..|    ..|:|.|.
 Worm    96 DEYLLEPTSADHKRRNSSNIVPPEPTPYPITSGESDLRQ--------TPSRLSNVECPPELELAP 152

  Fly   653 -------LRFFIEPE------KLVLDREIGHGEFGSVHSGWLLRKSGAGE--ESRLEVAIKMLSD 702
                   |.::.|.|      .:...|.:|.||||.:..|:|..|:...|  |||||||:|:..:
 Worm   153 INEKIMYLHYYAEVEINEEDLDISKGRPLGSGEFGIIRKGFLRSKNSKNEEKESRLEVAVKLPLN 217

  Fly   703 EHSNKQEFL--REASVMMRL-EHKCIVRLI-GIAKGEMLMMVQELAPLGSMLQYILDHGHEITAN 763
            |::..|:.|  .|..||..: :|..|:.|: ||..||..|:|.|....|.:|.::.|:....|.:
 Worm   218 EYNQIQQELIYDELKVMCAVGKHPNILALVGGITFGERKMIVSEFVENGDLLSFLRDNRIYFTND 282

  Fly   764 -------------AELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLR 815
                         .:|..:|.|||.||.||.....||||||.||:|:......:|:|||::|  |
 Worm   283 QWTLETEQDSLSLVDLLSFAFQIAKGMEYLIHVPCVHRDLALRNVLIKKNRIIRIADFGLAR--R 345

  Fly   816 PGSTEYQFTQG--GRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVD--- 875
            ..:.:|..||.  ...||.|.||||.:..:|:..|||||:||.::|:||||..||..:...|   
 Worm   346 HKNKDYYKTQSVDTPLPIHWMAPESIDKLLFTQKSDVWSYGVCLYELFSLGKSPYENVIKYDQRD 410

  Fly   876 -----AIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTEFFARD 924
                 .:..::.|:||.||....|.||.||:.||......|.||:...|||.::
 Worm   411 FYWKYVLSYLNEGKRLAQPAHADAEIYNVMKLCWDLDMNSRTTFLDCIEFFEKE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 106/288 (37%)
old-1NP_496130.2 PTKc 179..462 CDD:270623 105/284 (37%)
Blue background indicates that the domain is not in the aligned region.

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