DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and frk-1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001369901.1 Gene:frk-1 / 191635 WormBaseID:WBGene00001487 Length:390 Species:Caenorhabditis elegans


Alignment Length:318 Identity:102/318 - (32%)
Similarity:178/318 - (55%) Gaps:41/318 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 STESEMASYLHRKCSGTPSTPSATEVEAAKLR-------FFIEPEKLVLDREIGHGEFGSVHSGW 680
            ||.||:.:: |.    |..|| .:....||:|       :.|..:.:|.::::|.|.||.|   :
 Worm    91 STISELINW-HM----TTKTP-ISAASGAKIRRPMERSPWLINHDSIVANKKLGEGAFGDV---F 146

  Fly   681 LLRKSGAGEESRLEVAIKMLSDEHSN--KQEFLREASVMMRLEHKCIVRLIGIAKGE-MLMMVQE 742
            :......|::   |||:|.:..|.:.  :..|::||.:|.:.:||.:|:|||:|..| .||:|.|
 Worm   147 IAELDQGGKQ---EVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVME 208

  Fly   743 LAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISD 807
            ..|.||:|.::  ..::::...:|: :.::.|.|:.|||....:|||:||||.||:|:::.||||
 Worm   209 YCPNGSLLSHL--KKNKVSLIEKLR-FTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISD 270

  Fly   808 FGMSRS---LRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYG 869
            ||||.:   ::..:.|       :.||:|.|||:....:::|.:|:|:|||.:||::|.||.||.
 Worm   271 FGMSDNKDEIKDETLE-------KVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYP 328

  Fly   870 EISNVDA-IKLVDSGERLPQPN-LCPAYIYAVMQSCWKERPKDRPTF----VYLTEFF 921
            .::.:.. .|:|.:..|:..|: ..|.....|..:||::.|:.|.|.    ..|.||:
 Worm   329 GLTKIQTRAKIVVNDYRMKMPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHKKLREFY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 89/268 (33%)
frk-1NP_001369901.1 SH2_Fps_family 16..107 CDD:198224 8/21 (38%)
TyrKc 131..382 CDD:197581 87/266 (33%)
Blue background indicates that the domain is not in the aligned region.

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