DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Csk

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_031809.2 Gene:Csk / 12988 MGIID:88537 Length:450 Species:Mus musculus


Alignment Length:278 Identity:101/278 - (36%)
Similarity:153/278 - (55%) Gaps:25/278 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 AAKLRFF-----IEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQE 709
            ||:..|:     :..::|.|.:.||.||||.|.         .|:....:||:|.:.:: :..|.
Mouse   178 AAQDEFYRSGWALNMKELKLLQTIGKGEFGDVM---------LGDYRGNKVAVKCIKND-ATAQA 232

  Fly   710 FLREASVMMRLEHKCIVRLIGIAKGEM--LMMVQELAPLGSMLQYILDHGHEITANAELKVWASQ 772
            ||.|||||.:|.|..:|:|:|:...|.  |.:|.|....||::.|:...|..:.....|..::..
Mouse   233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297

  Fly   773 IACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQG-GRWPIRWYAP 836
            :...|.|||..:||||||||||:|::..:.||:||||:::       |...||. |:.|::|.||
Mouse   298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAP 355

  Fly   837 ESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQ 901
            |:.....||..|||||||:.:||::|.|..||..|...|.:..|:.|.::..|:.||..:|.||:
Mouse   356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 420

  Fly   902 SCWKERPKDRPTFVYLTE 919
            :||......||||:.|.|
Mouse   421 NCWHLDAATRPTFLQLRE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 96/257 (37%)
CskNP_031809.2 Interaction with PTPN22. /evidence=ECO:0000269|PubMed:8890164 9..70
SH3_CSK 11..67 CDD:212703
SH2_csk_like 78..175 CDD:198190
PTKc_Csk 188..443 CDD:133213 98/268 (37%)
Blue background indicates that the domain is not in the aligned region.

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