DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and map3k20

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_002934652.2 Gene:map3k20 / 100495797 XenbaseID:XB-GENE-985435 Length:790 Species:Xenopus tropicalis


Alignment Length:308 Identity:90/308 - (29%)
Similarity:134/308 - (43%) Gaps:58/308 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   642 TPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVH-SGWLLRKSGAGEESRLEVAIKMLSDEHS 705
            |.|..:::...|:||         ...|.|.||||: :.||.:..        |||:|.|     
 Frog     5 TASFVQIKFDDLQFF---------ENCGGGSFGSVYRAKWLSQDK--------EVAVKKL----- 47

  Fly   706 NKQEFLREASVMMRLEHKCIVRLIG-IAKGEMLMMVQELAPLGSMLQYI---------LDHGHEI 760
              .:..:||.::..|.|:.:::..| :.:.....:|.|.|..||:..||         :||    
 Frog    48 --LKIEKEAEILSMLSHRNVIQFYGAVLEPPNYCIVTEYAACGSLYDYINSTRSENMDMDH---- 106

  Fly   761 TANAELKVWASQIACGMHYLESQ---HFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQ 822
                 :..|:..:|.|||||..:   ..:||||.:||:::|.....||.|||.|| ....:|...
 Frog   107 -----IMAWSMDVAKGMHYLHMEAPIRVIHRDLKSRNVVITMDGILKICDFGASR-FHSHTTHMS 165

  Fly   823 FTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLP 887
            ..  |.:|  |.|||.......|...|.:|:||.:|||.:...|..|......|..:|:..|||.
 Frog   166 LV--GTFP--WMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLT 226

  Fly   888 QPNLCPAYIYAVMQSCWKERPKDRPTFVYL---TEFFARD---PDYQN 929
            .|:.||.....:|..||:...|.||:|..:   .|..:.|   ||..|
 Frog   227 IPSSCPQSFAELMHQCWEADSKKRPSFKQIISNLESMSNDSKLPDQCN 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 82/279 (29%)
map3k20XP_002934652.2 Protein Kinases, catalytic domain 22..263 CDD:473864 81/269 (30%)
SAM_superfamily 338..404 CDD:472832
Blue background indicates that the domain is not in the aligned region.

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