DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and phf6

DIOPT Version :10

Sequence 1:NP_524740.2 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001107695.1 Gene:phf6 / 779543 XenbaseID:XB-GENE-999439 Length:363 Species:Xenopus tropicalis


Alignment Length:310 Identity:72/310 - (23%)
Similarity:117/310 - (37%) Gaps:83/310 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NKELQCLICKYSDTDDLVFGEWMIVRNLQV--HYFCLLLSTHLPQRGGDSSGILGFLLRDIREEA 66
            |:|.:|             |:.:|..|.:|  |:.|:|.|:.|.....||..:.||.:.||::|.
 Frog    23 NREKEC-------------GQLLISSNQKVAAHHRCMLFSSALVSSQSDSENLGGFSIEDIQKEL 74

  Fly    67 AAAEKRKCWYCNKIGASLQCD--RCRSLFHLKCGLENRAVFE---FCGQYKSYCYKCRPMDDYKR 126
            ....|..|..|:..||::.||  .|...:|..|.|.::|..:   ..|.|..:|.|      :|.
 Frog    75 KRGRKLMCSLCHCPGATIGCDVKSCHRTYHYHCALRDKAHIQENPSQGMYTIFCRK------HKE 133

  Fly   127 QLQSNPPRNATCPICFSSIYKVELHCVVYGDCCRLGFAHK----KCMRQYALTSGYYLRCIWCRS 187
            |:|::..               ||.    |...|.|.|.:    :..|..:.||         .|
 Frog   134 QVQNSDD---------------ELE----GSFTRRGLAPQRGRGRGSRGKSRTS---------NS 170

  Fly   188 ERFRDSIRLQSVFVPDRDATWEKQRNAYRELHERNLKCDQPNC-LCPSGRTYNRLSWVILCCSSC 251
            ....:..||.|:...:..   |...:..|..|..:....:|.| .|.:|...|.....:...::.
 Frog   171 RGQSEESRLSSLHCTEET---ESSSSRDRSPHRSSPSDTRPKCGFCHAGDEENETRGKLHVFNAK 232

  Fly   252 AATSAHLKCLV---GALRL--PKKRERTDF---------------KCSMC 281
            .| :||.||::   |.::|  ..:.|..||               ||::|
 Frog   233 KA-AAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVIQEMKRGKRMKCTLC 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_524740.2 PHD_SF 9..117 CDD:473978 32/114 (28%)
PHD_SF 224..>260 CDD:473978 8/36 (22%)
PRK10263 <265..>493 CDD:236669 7/34 (21%)
phf6NP_001107695.1 ePHD1_PHF6 17..131 CDD:277180 35/126 (28%)
ePHD2_PHF6 210..327 CDD:277181 17/73 (23%)

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