DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-1 and ATPsynC

DIOPT Version :10

Sequence 1:NP_476801.1 Gene:Vha16-1 / 44307 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster


Alignment Length:65 Identity:25/65 - (38%)
Similarity:36/65 - (55%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 156
            :|||.| ||.:|..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|::|..|
  Fly    72 IGAGAATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134

  Fly   157  156
              Fly   135  134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-1NP_476801.1 V_ATP_synt_C 15..122 CDD:130170 12/25 (48%)
ATP-synt_Vo_c_ATP6C_rpt2 90..157 CDD:349416 25/65 (38%)
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 25/65 (38%)

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