DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Vha16-1 and atp5mc1

Sequence 1:NP_476801.1 Gene:Vha16-1 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_998193.1 Gene:atp5mc1 ZFINID:ZDB-GENE-040426-1966 Length:138 Species:Danio rerio

Alignment Length:114 Identity:32/115 (28%)
Similarity:56/115 (49%) Gaps:17/115 (15%)


  Fly    50 RPELIMK--SIIPVVMAGIIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLA-VGFSGLAAG 111
            |||...:  :::||..|.::.:.......:.:..::..:|:        :|||.| ||.:|..||
Zfish    31 RPEARSEQAALLPVSEAALLNLTRGFQTSVASRDIDTAAKF--------IGAGAATVGVAGSGAG 87

  Fly   112 FAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 156
              ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
Zfish    88 --IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 134

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Vha16-1NP_476801.1 PRK06558 13..159 CDD:235830 32/115 (28%)
V_ATP_synt_C 15..122 CDD:130170 19/75 (25%)
ATP-synt_C 96..156 CDD:278563 25/65 (38%)
atp5mc1NP_998193.1 ATP9 64..138 CDD:164765 26/82 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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