Protein Alignment Vha16-1 and Vha16-2

DIOPT Version :10

• Sequence 1: NP_476801.1
• Gene: Vha16-1 / 44307
• FlyBaseID: FBgn0262736
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_729707.1
• Gene: Vha16-2 / 39282
• FlyBaseID: FBgn0028668
• Length: 158
• Species: Drosophila melanogaster
• Alignment Length: 159
• Identity: 109/159 - (68%)
• Similarity: 129/159 - (81%)
• Gaps: 2/159 - (1%)

  Fly     1 MSSEVSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 65
            |.:...::.|.|..|.|..|||.||||:.|||:||||.||.|||.|:|.||::|||:||||||||
  Fly     1 MVTAALNEEPSYAFFLGCTGAAVAIIFTTLGASYGTAVSGVGIAKMAVNRPDMIMKAIIPVVMAG 65

  Fly    66 IIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 130
            |||||||||:|||||::.:  .|::...::||||||:||..||.||.||||.|||||||||:|||
  Fly    66 IIAIYGLVVSVLIAGSIGD--DYTMEDSYVHLGAGLSVGLPGLTAGVAIGIAGDAGVRGTAEQPR 128

  Fly   131 LFVGMILILIFAEVLGLYGLIVAIYLYTK 159
            |||||:|||||||||.|||||||||||||
  Fly   129 LFVGMVLILIFAEVLALYGLIVAIYLYTK 157

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-1	NP_476801.1	V_ATP_synt_C	15..122	CDD:130170	70/106 (66%)
		ATP-synt_Vo_c_ATP6C_rpt2	90..157	CDD:349416	51/66 (77%)
Vha16-2	NP_729707.1	PRK13469	15..120	CDD:469780	70/106 (66%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..155	CDD:349416	51/63 (81%)