DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Vha16-1 and atp6v0cb

Sequence 1:NP_476801.1 Gene:Vha16-1 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_991117.1 Gene:atp6v0cb ZFINID:ZDB-GENE-030131-4127 Length:153 Species:Danio rerio

Alignment Length:155 Identity:128/156 (82%)
Similarity:142/156 (91%) Gaps:2/156 (1%)


  Fly     5 VSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 69
            :||.:|.|.|||.||||::|::|||||||||||||||||||||||||||||||||||||||||||
Zfish     1 MSSGSPEYSPFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65

  Fly    70 YGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVG 134
            ||||||||||.::.:  |.:||:.|:||||||:||.|||||||||||||||||||||||||||||
Zfish    66 YGLVVAVLIANSISD--KITLYKSFLHLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVG 128

  Fly   135 MILILIFAEVLGLYGLIVAIYLYTK 159
            |||||||||||||||||||:.|.||
Zfish   129 MILILIFAEVLGLYGLIVALILSTK 153

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Vha16-1NP_476801.1 PRK06558 13..159 CDD:235830 123/146 (84%)
V_ATP_synt_C 15..122 CDD:130170 88/107 (82%)
ATP-synt_C 96..156 CDD:278563 56/60 (93%)
atp6v0cbNP_991117.1 V_ATP_synt_C 11..116 CDD:130170 88/107 (82%)
ATP-synt_C 90..151 CDD:278563 57/61 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C251478108
eggNOG 1 0.900 E1_COG0636
Hieranoid 1 1.000
Homologene 1 1.000 H68199
Inparanoid 1 1.050 244 1.000 Inparanoid score I3213
OMA 1 1.010
OrthoDB 1 1.010 D1534092at2759
OrthoFinder 1 1.000 FOG0001016
OrthoInspector 1 1.000 T128653
orthoMCL 1 0.900 OOG5_126803
Panther 1 1.100 LDO PTHR10263
Phylome 1 0.910 0.667 Consistency score
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1636
TreeFam 1 0.960
ZFIN 00.000 Not matched by this tool.
1413.800

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