Protein Alignment Vha16-1 and vma11

DIOPT Version :10

• Sequence 1: NP_476801.1
• Gene: Vha16-1 / 44307
• FlyBaseID: FBgn0262736
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_593600.1
• Gene: vma11 / 2541780
• PomBaseID: SPAC732.01
• Length: 162
• Species: Schizosaccharomyces pombe
• Alignment Length: 159
• Identity: 97/159 - (61%)
• Similarity: 123/159 - (77%)
• Gaps: 3/159 - (1%)

  Fly     1 MSSEVSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 65
            |||.:.   |||..|||..|..::::||.|||.||||.:|.||||:...|||::|||:|||||:|
pombe     1 MSSNLC---PIYSSFFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSG 62

  Fly    66 IIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 130
            ||.:||||::|||||.:...:.|||:.|||||.||||||.:|:|||:|||:|||.||:...:|.|
pombe    63 IIGVYGLVMSVLIAGDMSPDNDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDR 127

  Fly   131 LFVGMILILIFAEVLGLYGLIVAIYLYTK 159
            :||.|:||||||||||||||||.:.|.||
pombe   128 IFVSMVLILIFAEVLGLYGLIVGLILQTK 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-1	NP_476801.1	V_ATP_synt_C	15..122	CDD:130170	65/106 (61%)
		ATP-synt_Vo_c_ATP6C_rpt2	90..157	CDD:349416	45/66 (68%)
vma11	NP_593600.1	PRK13469	12..119	CDD:469780	65/106 (61%)
		ATP-synt_Vo_c_ATP6C_rpt2	87..153	CDD:349416	45/65 (69%)