Protein Alignment Vha16-1 and vha-3

DIOPT Version :10

• Sequence 1: NP_476801.1
• Gene: Vha16-1 / 44307
• FlyBaseID: FBgn0262736
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_001367642.1
• Gene: vha-3 / 177018
• WormBaseID: WBGene00006912
• Length: 161
• Species: Caenorhabditis elegans
• Alignment Length: 154
• Identity: 108/154 - (70%)
• Similarity: 124/154 - (80%)
• Gaps: 1/154 - (0%)

  Fly     6 SSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 70
            :::...|.||||.||||||.||:.||||||||||..||.:|.||||||||||:|||:|||||.||
 Worm     7 TAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIY 71

  Fly    71 GLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVG 134
            |||||:::.|.:...|. |.|.:||.||.|||..|..||.||:||||||||||||||||||||||
 Worm    72 GLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVG 136

  Fly   135 MILILIFAEVLGLYGLIVAIYLYT 158
            |||||||:|||||||:|||:.|.|
 Worm   137 MILILIFSEVLGLYGMIVALILGT 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-1	NP_476801.1	V_ATP_synt_C	15..122	CDD:130170	73/107 (68%)
		ATP-synt_Vo_c_ATP6C_rpt2	90..157	CDD:349416	52/66 (79%)
vha-3	NP_001367642.1	V_ATP_synt_C	16..124	CDD:130170	73/107 (68%)
		ATP-synt_Vo_c_ATP6C_rpt2	92..158	CDD:349416	52/65 (80%)