Protein Alignment: Vha16-1 and Atp5mc2

• Sequence 1: NP_476801.1
• Gene: Vha16-1
• FlyBaseID: FBgn0262736
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 120
• Identity: 35/121 (29%)
• Similarity: 57/121 (47%)
• Gaps: 27/121 (22%)

  Fly    42 GIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLA-VGF 105
            |::.::|.||   :.|:||.......|         |:..::..:|:        :|||.| ||.
  Rat    40 GLSCLAVRRP---LTSLIPSRSFQTSA---------ISRDIDTAAKF--------IGAGAATVGV 84

  Fly   106 SGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 156
            :|..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
  Rat    85 AGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-1	NP_476801.1	PRK06558	13..159	CDD:235830	35/121 (29%)
		V_ATP_synt_C	15..122	CDD:130170	22/81 (27%)
		ATP-synt_C	96..156	CDD:278563	25/65 (38%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	26/82 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG0636
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900