Protein Alignment Vha16-1 and Atp5mc2

DIOPT Version :10

• Sequence 1: NP_476801.1
• Gene: Vha16-1 / 44307
• FlyBaseID: FBgn0262736
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2 / 171082
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 120
• Identity: 35/120 - (29%)
• Similarity: 57/120 - (47%)
• Gaps: 27/120 - (22%)

  Fly    42 GIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLA-VGF 105
            |::.::|.||   :.|:||.......|         |:..::..:|:        :|||.| ||.
  Rat    40 GLSCLAVRRP---LTSLIPSRSFQTSA---------ISRDIDTAAKF--------IGAGAATVGV 84

  Fly   106 SGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 156
            :|..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
  Rat    85 AGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-1	NP_476801.1	V_ATP_synt_C	15..122	CDD:130170	22/80 (28%)
		ATP-synt_Vo_c_ATP6C_rpt2	90..157	CDD:349416	25/72 (35%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	26/81 (32%)