DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoxN and NHP6A

DIOPT Version :10

Sequence 1:NP_001260269.1 Gene:SoxN / 44275 FlyBaseID:FBgn0029123 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_015377.1 Gene:NHP6A / 856165 SGDID:S000006256 Length:93 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:23/66 - (34%)
Similarity:39/66 - (59%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEA 232
            |..|...:|.  ||.::|:|.::...|..:.|:||.:...::.|:||.:||.|:..||:|:  ||
Yeast    12 TRKKKDPNAP--KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPY--EA 72

  Fly   233 K 233
            |
Yeast    73 K 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoxNNP_001260269.1 HMG-box_SoxB 177..252 CDD:438790 20/57 (35%)
NHP6ANP_015377.1 HMG-box_NHP6-like 17..88 CDD:438792 21/61 (34%)

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