DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoxN and SOX3

DIOPT Version :10

Sequence 1:NP_001260269.1 Gene:SoxN / 44275 FlyBaseID:FBgn0029123 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_005625.2 Gene:SOX3 / 6658 HGNCID:11199 Length:446 Species:Homo sapiens


Alignment Length:385 Identity:147/385 - (38%)
Similarity:183/385 - (47%) Gaps:94/385 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GAGSALSSLTGGSSNNNNNS--ATANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEI 209
            |||.:.::..||:::...:|  |:........||||||||||||||||||||||.:|||||||||
Human   105 GAGKSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEI 169

  Fly   210 SKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPM-GGLMPGQ 273
            ||||||.||.|:::|||||||||||||||||||:||||||||||||||.| |:||.: .||:|  
Human   170 SKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLK-KDKYSLPSGLLP-- 231

  Fly   274 TVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAAAAAQQA------RQDMYQMNAPNG 332
                                        .|.:||||||||||||..:      |.|.|  ...||
Human   232 ----------------------------PGAAAAAAAAAAAAAAASSPVGVGQRLDTY--THVNG 266

  Fly   333 YMPNGYMMHADPAGAAAYQTSYMG----------QHYAAQRYDMGHMYNNGYAMYQTVSGGQTSP 387
            :....|.:..:..|.|  |...|.          .|    ||||              :|.|.||
Human   267 WANGAYSLVQEQLGYA--QPPSMSSPPPPPALPPMH----RYDM--------------AGLQYSP 311

  Fly   388 YGSSLQQPG------------SPSPYGGSSLQQQPGSPTPYG----GGGGGGGQVSCQSHSPSDS 436
                :..||            :.|.|||.:......:...||    .........:..|..|..|
Human   312 ----MMPPGAQSYMNVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGS 372

  Fly   437 SIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMY 496
            .:||||.||.|:..:.:....:.:...|...|  ......||.||:...||.|:.:...|
Human   373 VVKSEPSSPPPAIASHSQRACLGDLRDMISMY--LPPGGDAADAASPLPGGRLHGVHQHY 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoxNNP_001260269.1 HMG-box_SoxB 177..252 CDD:438790 66/74 (89%)
SOX3NP_005625.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..140 9/34 (26%)
HMG-box_SoxB 137..212 CDD:438790 66/74 (89%)
SOXp 208..302 CDD:463537 41/132 (31%)
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 399..407 2/9 (22%)
Blue background indicates that the domain is not in the aligned region.

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