Protein Alignment SoxN and sox13

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_012818604.1
• Gene: sox13 / 549758
• XenbaseID: XB-GENE-481889
• Length: 577
• Species: Xenopus tropicalis
• Alignment Length: 219
• Identity: 67/219 - (30%)
• Similarity: 94/219 - (42%)
• Gaps: 53/219 - (24%)

  Fly    71 QSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSP-------------------LHSSSELSPT 116
            |.||..||.:..|      |.||.|........|||                   :..:.:|...
 Frog   278 QVPNSRSSPKYRM------SPVGSQGGSSMDSASSPQKANLPLGFLGEGDAITKAIQEACQLLHG 336

  Fly   117 QSSIGSHHM---------TSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKN 172
            |::...||.         |.|....|.....||.::..||....:....|
 Frog   337 QNTSPEHHQQKYRKELLDTLPEKEVQDGASLQHTEESVLGCNMDIDGSRG--------------- 386

  Fly   173 QQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRA 237
                ..:||||||||||::.:|||:....|.||||.|||.||::||.:|.:||:|:.:|..||..
 Frog   387 ----SHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSR 447

  Fly   238 VHMKEHPDYKYRPRRKTKTLTKTK 261
            .|::.:|||||:||.|...:.:.|
 Frog   448 QHLERYPDYKYKPRPKRTCIVEGK 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	39/74 (53%)
sox13	XP_012818604.1	HMG-box_SoxD	388..464	CDD:438839	40/75 (53%)