Protein Alignment SoxN and Sox7

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001099515.1
• Gene: Sox7 / 290317
• RGDID: 1310038
• Length: 383
• Species: Rattus norvegicus
• Alignment Length: 518
• Identity: 117/518 - (22%)
• Similarity: 172/518 - (33%)
• Gaps: 212/518 - (40%)

  Fly   178 RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKE 242
            |::|||||||||::.:|:::|..||.:||:|:||.||..||.|:.|:|||::|||:|||..||::
  Rat    44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQD 108

  Fly   243 HPDYKYRPRRKT--KTLTKTKEK-YPMGGLMPGQ-------TVGGGAPGEPVTPTRVQGQPGQNQ 297
            :|:||||||||.  |.|.|..:. :.:..|...|       ::|.|..||
  Rat   109 YPNYKYRPRRKKQGKRLCKRVDPGFLLSSLSRDQNTLPEKNSIGRGPLGE--------------- 158

  Fly   298 SLNGSGGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSYMGQHYAAQ 362
                                   ::|..:. ||...:|..:..:.:  ||||...|.
  Rat   159 -----------------------KEDRGEY-APGATLPGLHSCYRE--GAAAAPGSV-------- 189

  Fly   363 RYDMGHMYNNGYAMYQTVSGGQTSPYGSSLQQPGSPSP---------YGGSSLQQQPGSPTPYGG 418
                                 .|.|||  |..|...||         :..||.|::.|.|
  Rat   190 ---------------------DTYPYG--LPTPPEMSPLDALEPEQTFFSSSCQEEHGHP----- 226

  Fly   419 GGGGGGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAA 483
                       .|.|   .:...|.||                     |::.:....:....:.|
  Rat   227 -----------HHLP---HLPGPPYSP---------------------EFTPSPLHCSHPLGSLA 256

  Fly   484 AGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQHQQIPQQHHTM 548
            .|                         .||.:     ||.......|.......|......|..:
  Rat   257 LG-------------------------QSPGV-----SMMSSVPGCPPSPAYYSHATYHPLHPNL 291

  Fly   549 QQQQQQHHLQHQQSLRAMAPLAHMXEMASAYGAAGSSVSVSPPLPPYMPTAPQQQQ------QQQ 607
            |                    ||: :::            .||..|...|..|..|      ..:
  Rat   292 Q--------------------AHLGQLS------------PPPEHPGFDTLDQLSQVELLGDMDR 324

  Fly   608 QQQQQLLNGRPSPTASGSSGGRSSAHSSGHTAAHSPALAAAYQLTPSAATSSATSAAAAAATA 670
            .:..|.||         :.|...||...|....|:|    ..|.||:..|.::..:..|.|||
  Rat   325 NEFDQYLN---------TPGHPDSASGVGTLTGHAP----LSQGTPTGPTETSLISVLADATA 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	42/73 (58%)
Sox7	NP_001099515.1	HMG-box_SoxF_SOX7	34..121	CDD:438849	45/76 (59%)
		Sox17_18_mid	178..222	CDD:463454	16/76 (21%)