Protein Alignment SoxN and Sox13

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_011246247.1
• Gene: Sox13 / 20668
• MGIID: 98361
• Length: 621
• Species: Mus musculus
• Alignment Length: 327
• Identity: 92/327 - (28%)
• Similarity: 135/327 - (41%)
• Gaps: 85/327 - (25%)

  Fly    75 PLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSS-----ELSPTQSSIGSHHMTS----PVS 130
            ||..|.|..|..:..|.|......|:..|  ||:.::     || |..||..|..|.|    |.|
Mouse   263 PLQLLHSPPAPVVKRSGVAAHHPLQEPPQ--PLNLTAKPKVPEL-PNTSSSPSLKMNSCGPRPAS 324

  Fly   131 HQQHTQQQQHGQQQ----HLGAGSA-----------LSSLTGGSSNNNN----------NSATA- 169
            |...|:..|.....    .||.|.|           |.|.:|...|:.|          :|:.|
Mouse   325 HGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGALENSPNTPFRKDLISLDSSPAK 389

  Fly   170 ----------------------------NKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHN 206
                                        ::|..|   :||||||||||::.:|||:....|.|||
Mouse   390 ERLEESCVHPLEEAMLSCDMDGSRHFSESRNSSH---IKRPMNAFMVWAKDERRKILQAFPDMHN 451

  Fly   207 SEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMP 271
            |.|||.||::||.::..||:|:.:|..||...|::::|||||:||.|...:.:.:.      |..
Mouse   452 SSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCVVEGRR------LRV 510

  Fly   272 GQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAA--AAAAAAAQQARQDMYQMNAPNGYM 334
            |:.       :.:..||.|| ..|:.::....|.|..::  ....||.....:.:.:...|.|..
Mouse   511 GEY-------KALMRTRRQG-ARQSYTIPPQAGQAQVSSDILFPRAAGLPLARPLVEHYDPQGLD 567

  Fly   335 PN 336
            ||
Mouse   568 PN 569

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	38/74 (51%)
Sox13	XP_011246247.1	HMG-box_SoxD	423..499	CDD:438839	40/78 (51%)