| Sequence 1: | NP_001260269.1 | Gene: | SoxN / 44275 | FlyBaseID: | FBgn0029123 | Length: | 761 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035568.1 | Gene: | Sox12 / 20667 | MGIID: | 98360 | Length: | 314 | Species: | Mus musculus |
| Alignment Length: | 228 | Identity: | 81/228 - (35%) |
|---|---|---|---|
| Similarity: | 111/228 - (48%) | Gaps: | 64/228 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 179 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEH 243
Fly 244 PDYKYRPRRKTK-TLTKTKEKYPMGG-----LMPGQ-------------TVGGGAPG-------- 281
Fly 282 -EPVTPTRVQGQPGQN---------------QSLNGSGGSAAAAAAAA---------------AA 315
Fly 316 AAQQARQDMYQMNAPNGYMPNGYM--MHADPAG 346 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SoxN | NP_001260269.1 | HMG-box_SoxB | 177..252 | CDD:438790 | 46/72 (64%) |
| Sox12 | NP_035568.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | 81/228 (36%) | |
| HMG-box_SoxC_SOX12 | 29..116 | CDD:438847 | 48/75 (64%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 101..287 | 43/167 (26%) | |||
| Required for transcriptional activation activity and synergistic coactivation of transcriptional activity with POU3F2. /evidence=ECO:0000269|PubMed:18403418 | 282..314 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||