Protein Alignment SoxN and egl-13

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001024918.1
• Gene: egl-13 / 180833
• WormBaseID: WBGene00001182
• Length: 470
• Species: Caenorhabditis elegans
• Alignment Length: 297
• Identity: 85/297 - (28%)
• Similarity: 139/297 - (46%)
• Gaps: 61/297 - (20%)

  Fly    37 LAPLMNLG----QSHLTHSQLSHHNHHHHHMSAHIAASQS------------------------- 72
            ::|:::.|    :..|...:|..|......::..:.|:||
 Worm   155 MSPMLHAGNFDSEMLLRQHELMQHQQQQMIIANMLKATQSLPLLFNGGLNYEAILNNPVLNATIA 219

  Fly    73 ---PNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELSPTQSSIGSHHMTSPVS---- 130
               ||||:|..|.:..:::.........|..::..:||:.|.: :|:.::|..    ||:|
 Worm   220 GHLPNPLASNISLLQKSISAKLAAAGNMQTVEKVETPLNLSKD-TPSPTAIPQ----SPLSGFRL 279

  Fly   131 -HQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQR 194
             :...|.....||..:..:.::....|.|:::..:..||.....:..:.:||||||||||:|.:|
 Worm   280 PYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRPMNAFMVWARDER 344

  Fly   195 RKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKT----- 254
            ||:....|.||||.|||.||::||.:|.|||:|:.:|..||..:||::||||:||||.|.
 Worm   345 RKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVID 409

  Fly   255 ---------KTLTKTKEKYPMGGLMPGQTVGGGAPGE 282
                     ||:.|||:     .||.|...|...|.:
 Worm   410 GKKVRVNEYKTIMKTKK-----DLMWGDEPGFSQPSD 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	43/74 (58%)
egl-13	NP_001024918.1	HMG-box_EGL13-like	327..404	CDD:438848	44/76 (58%)