Protein Alignment SoxN and sox17b.2

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001090837.1
• Gene: sox17b.2 / 100038235
• XenbaseID: XB-GENE-495335
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 425
• Identity: 109/425 - (25%)
• Similarity: 165/425 - (38%)
• Gaps: 144/425 - (33%)

  Fly   120 IGSHHMTSPVSHQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMN 184
            :|.:..|.|::..|..:.::.       ||||          |:...|.|        |::||||
 Frog     2 MGQYEWTDPLTMFQDAKTKKE-------AGSA----------NSRGKAEA--------RIRRPMN 41

  Fly   185 AFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYR 249
            |||||::.:|:::|..||.:||:|:||.||..||.|:.:.||||:.||:|||..|::::||||||
 Frog    42 AFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLASKRPFVKEAERLRVQHIQDYPDYKYR 106

  Fly   250 PRRKTKTLTKTKEKYPMGGLMPGQTVGGGAPGEPVTPTRVQGQPGQNQSLNGSGGSAAAAAAAAA 314
            |||| |.:.:.:|.:.....:||..|.|           .....|||..:..||
 Frog   107 PRRK-KQVKREEEGFLPSADIPGPQVMG-----------CNAMVGQNYKMQYSG----------- 148

  Fly   315 AAAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQTSY-MGQHYAAQRYDMGHMYNNGYAM-- 376
               |.::|..        ..|.||....:|.|  .|...| :.::|.:|.       ::||..
 Frog   149 ---QNSQQSQ--------ITPAGYFEDHNPVG--FYYRGYNVPKYYMSQN-------SSGYCSPP 193

  Fly   377 ----YQTVSGGQTSPYGSSLQQPGSPSPYGGSSLQQQPGSPTPYGGGGGGGGQVSCQSHSPSDSS 437
                ||.:|....|.|          .||     ||...:|..       |.|:          :
 Frog   194 TQGEYQALSYNFNSSY----------IPY-----QQNASAPAM-------GKQM----------A 226

  Fly   438 IKSEPVSPSPSAIALNNNNNINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQ 502
            :|...:..||       .:.|....:..:.|:........|.....|
 Frog   227 VKENIIQESP-------EHGIMGCQVSPQMYNGQMYVPECAKTHPVA------------------ 266

  Fly   503 RHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQ 537
                  ||      :||.|:.|.||.:.|.:|..|
 Frog   267 ------QT------EQHSSLHQSQQMVTQNYLPSQ 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	41/74 (55%)
sox17b.2	NP_001090837.1	HMG-box_SoxF_SOX17	30..110	CDD:438850	44/87 (51%)