Protein Alignment SoxN and sox5

DIOPT Version :10

• Sequence 1: NP_001260269.1
• Gene: SoxN / 44275
• FlyBaseID: FBgn0029123
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_031753364.1
• Gene: sox5 / 100038209
• XenbaseID: XB-GENE-487032
• Length: 763
• Species: Xenopus tropicalis
• Alignment Length: 377
• Identity: 89/377 - (23%)
• Similarity: 155/377 - (41%)
• Gaps: 69/377 - (18%)

  Fly    16 TMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHHHHMSAH----------IAAS 70
            |.|.:.::......:.||.|..:|.:....|.|.|..:.       ..||.          :::.
 Frog   391 TQPLNLSAKPKGSDSKSPSSPTSPHIPRLSSALAHKPIC-------STSASTPLRVNSIDILSSI 448

  Fly    71 QSPNPLSSLQSSMANTLNGSQVGQQQQQQQQQQSSPLHSSSELS-----PTQSSIGSHHMTSPVS 130
            .||..|:...:.........|:.:|.:::||.....:.:|..|:     ..:||:.|  :|..::
 Frog   449 TSPGYLNDHDAVTKAIQEARQMKEQLRREQQALDGKVVNSLGLNNCRTDKDKSSLES--LTQQLT 511

  Fly   131 HQQHTQQQQHGQQQHLGAGSALSSLTGGSSNNNNNSATANKNQQHADRVKRPMNAFMVWSRGQRR 195
            .:.:..:..|.......:|.:..|.....|.....|.....|:.|   :||||||||||::.:||
 Frog   512 GKPNEDKFSHAMMDFNLSGDSDGSAGISESRIYRESRGRGSNEPH---IKRPMNAFMVWAKDERR 573

  Fly   196 KMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKT 260
            |:....|.||||.|||.||::||.::..||:|:.:|..||...|::::|||||:||.|...|...
 Frog   574 KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDG 638

  Fly   261 KE---------------------------KYPM---GGLMPGQTVGGGAPGEPVTPTRVQGQPGQ 295
            |:                           :.|:   |.:.||.....|.|...:        |.:
 Frog   639 KKLRIGEYKAIMRSRRQEMRQYFNVGQQAQIPISTAGVVYPGAIAMAGMPSPHL--------PSE 695

  Fly   296 NQSLNGS---GGSAAAAAAAAAAAAQQARQDMYQMNAPNGYMPNGYMMHADP 344
            :.|::.|   |.....:...........::::::.:. ||.|.:.|....||
 Frog   696 HSSVSSSPEPGMPVIQSTYGIKEEEPHIKEEIHREDI-NGEMYDEYDEDDDP 746

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SoxN	NP_001260269.1	HMG-box_SoxB	177..252	CDD:438790	38/74 (51%)
sox5	XP_031753364.1	HMG-box_EGL13-like	555..632	CDD:438848	40/79 (51%)