DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RABA5a

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_199563.1 Gene:RABA5a / 834802 AraportID:AT5G47520 Length:221 Species:Arabidopsis thaliana


Alignment Length:187 Identity:62/187 - (33%)
Similarity:99/187 - (52%) Gaps:3/187 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |::::|...|||:.|:.|:.::..:.....  ||.|.|.|..:.::..:||.||||||||||:||
plant    16 KIVLIGDSAVGKSNLLARFARDEFYPNSKS--TIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            |...|||.|..|:||:|:::.:||..|..|:.|||.:....::..|||||.|::..|.||..|..
plant    79 VTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDLREVSTAEGK 143

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQSTDSLAYTN 193
            ..|.:.|..:.|||......:...|.:..:.:..:... |..|.:.....|..:.:|
plant   144 ALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSR-KVMSSQELNKQDPASLSN 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 58/158 (37%)
RABA5aNP_199563.1 Rab11_like 12..176 CDD:206660 58/161 (36%)

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