DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and RAB6A

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_181989.1 Gene:RAB6A / 819069 AraportID:AT2G44610 Length:208 Species:Arabidopsis thaliana


Alignment Length:212 Identity:65/212 - (30%)
Similarity:110/212 - (51%) Gaps:20/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYI----KNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQE 67
            |::.||.:.||||.::.|::    .||..      .||.:.|.:..:.|::..::||:|||||||
plant    11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQ------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

  Fly    68 RYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSR 132
            |:|::.|.|.|:::.|::|:|:...::|.....||.|:.......:|:.|||||.|:..:|.||.
plant    70 RFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSI 134

  Fly   133 EEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSPSLRSFQSTDSLAYTNTNTA 197
            |||...|..:...:.|||.:....::.:|...|..|         |.:.:..||......:.|..
plant   135 EEAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL---------PGMETLSSTKQEDMVDVNLK 190

  Fly   198 FSHTVAALA-RSSGNAA 213
            .|:..|:|| :.||..:
plant   191 SSNANASLAQQQSGGCS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 53/162 (33%)
RAB6ANP_181989.1 Rab6 10..170 CDD:206654 54/164 (33%)

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