DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX1 and rab8a

DIOPT Version :10

Sequence 1:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001083031.1 Gene:rab8a / 571897 ZFINID:ZDB-GENE-070424-36 Length:207 Species:Danio rerio


Alignment Length:175 Identity:63/175 - (36%)
Similarity:101/175 - (57%) Gaps:5/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71
            |:|::|..|||||.::.|:.::..:  .:.:.||.:.|....|.||..||||||||||||||:|.
Zfish    10 KLLLIGDSGVGKTCVLFRFSEDAFN--STFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRT 72

  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136
            :...|||.|...:||:|:|..|:|..||:||:.:..:....:...::|||.|:..:|.||::...
Zfish    73 ITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCDINEKRQVSKDRGE 137

  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGLVRLAD---EGKSP 178
            ..|...|..:.|||.:.:..:|..|::.|:.:....|   ||.:|
Zfish   138 KLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDTKLEGNNP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX1NP_524713.1 Rab 7..166 CDD:206640 58/158 (37%)
rab8aNP_001083031.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 59/163 (36%)

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