DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sns and nphs1

DIOPT Version :10

Sequence 1:NP_001036532.1 Gene:sns / 44097 FlyBaseID:FBgn0024189 Length:1542 Species:Drosophila melanogaster
Sequence 2:XP_073779348.1 Gene:nphs1 / 692352 ZFINID:ZDB-GENE-051102-1 Length:1287 Species:Danio rerio


Alignment Length:1364 Identity:395/1364 - (28%)
Similarity:619/1364 - (45%) Gaps:191/1364 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HQRHQQHQQHQQQQQQQQQQQHIKWQQHATKRRRCRQHWIKHLQLLRLLAVIVLASAPVPSHAQQ 71
            ||.|.|.:..:|::..:.||.:.    .|..:......|:.    |..|:...|..........|
Zfish    15 HQEHLQRRTFRQRRIVEHQQIYF----DAVDQLAAMDSWLS----LVFLSGCFLLLVDFKGVCGQ 71

  Fly    72 QKFRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAVIPGFPRYSVLGDRKQGIYNL 136
            |.|:|.|.::.|..||.|:::|||...:|||||.|||..||....:||:||||:.||:|:|.|:|
Zfish    72 QAFKTEPRNVTVRAGATALLKCEVLRASGAVQWVKDGLLLGPLRSLPGYPRYSMTGDQKKGQYHL 136

  Fly   137 RISNASINDDADYQCQVGPAR-----LNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDL 196
            :|.:.::.||..|:||||.:.     ::..:..|.::....|...:|       |:....|.:..
Zfish   137 QILDVTLEDDGPYECQVGRSESSRPIVSRTVWLNVQIPSSQPYFQLE-------SEEPWVEGEQY 194

  Fly   197 QLKCIVANAKPAAQIVWYRGNVEYKPEKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQAR 261
            .:.||..:|||.|:|..:|...|.. |....|:..|..|...|.:.:.::....||....||:|:
Zfish   195 TVTCIAPDAKPPAEITMFRDGEELL-ESESYTMSGSQDKLQNTHAEVTIRARSSDDTRRLTCRAK 258

  Fly   262 H----KALSPDMPMRATVQLSVLYPPGPPYIEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYK 322
            :    :||...|.|:      |.:||..|.|.|.. .|.::.|..::::|.|.||||.|.|.|.|
Zfish   259 NPASPRALETGMTMK------VYFPPQAPMIMGLE-NEEVKAGSFLKVVCMSYGGNPLATLHWTK 316

  Fly   323 NGSQIRMAYRTS--GRLSENIYTFTAEAGDNKARFRCEASNVMSQNPLKAEVELSVLFAPTHVTV 385
            ||..:..::...  .|.:.::.....:..||.|..:|::.|.::::|:.....|:|||.|..||:
Zfish   317 NGEVLSTSWDVDFVSRRASSVLKMEVKPEDNHAVLQCQSINQVTRSPMSLTRTLTVLFEPAEVTL 381

  Fly   386 MGPTEARVGDIVPLTCTTAPSNPPAEIKWMVGGRQVRNATSKTIVSPE-GGWTTTSNITAVVEPN 449
            :|..||..|:.:.|:|:|:.||||..|:|.:|.::: |.|..|....: ||..|.||:|..|...
Zfish   382 LGSFEAVEGEEINLSCSTSSSNPPVHIRWWLGFKEL-NRTEVTFAEGDNGGMMTVSNLTHKVSRE 445

  Fly   450 KRSLVVICHGLNMQLTENVVSTHTINVLYPP------APPLISGYMEGQIIPAGSVQKLLCVSSG 508
            ...|.:.|...|.....:.|....:.|.|||      |||      ....:.:||..:|:|.|||
Zfish   446 DNGLSLQCEAFNKGTRFSSVRAAELIVYYPPQKVWLDAPP------PNVFLHSGSTLRLVCFSSG 504

  Fly   509 GNPLATLTWYKNDKRINSVIR--AADKSVSAEITILANVSDNQAQYRCEASNSATEIPLFQSTTL 571
            |||...|||.||:|.:.:..:  ::::.||.|:.::.:.|||.|.|||::||.|.:: |...|..
Zfish   505 GNPTGQLTWLKNNKVVLTASKQVSSERGVSRELLLILHPSDNLATYRCDSSNKAKKV-LSTQTKF 568

  Fly   572 SVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSKPGLWGGTVS 636
            .|.|...:|||..:.:|||.|....:.|.:.||||.|.:||....:.::|::...|...:||...
Zfish   569 RVLFPAVSVKIVAKQKELRRGQTLDLDCLAGSSNPTANISWSLGPVILKGVDQAPKRAEFGGMSR 633

  Fly   637 TLEFRVNVTQEMNGQVYTCQSANEALQRSAHEAVSLDVLYRPKFVPPPSSTAVGVEGESLQVSLQ 701
            |.:..:.:......:..|||:.:..|....:...|||||:.|:|..........:|.|:..:..:
Zfish   634 TSKLSLTLESHHWRKRITCQAFSNVLSEGVNNFYSLDVLFPPEFSDEQPDEVQVIEDETATLPAK 698

  Fly   702 TRANPTPVTYKWTKDGTTIPQDGDHRIFADGGSLNFTRLHRDDAGIYSCSASNSQGGATLNITVV 766
            ..|||..:|.:|...|..:.::.|.|......:|....:.|.|.|.|....||::|.....:.:.
Zfish   699 VSANPDEITCEWIFQGEKLVKERDPRYTFSDWTLEIVNVSRRDGGDYIIECSNAEGSNRTKLRLD 763

  Fly   767 VEYGTTIKSVSENIVVNPGEDAMLSCTVEGKPLTEEHVKWERVG---YDMTVKTSTTFANGTSYL 828
            |:|..|::..|:.:.||.|:.|.|.|..:..|:|.....|:.:|   .|...:.|..  :||..|
Zfish   764 VQYSPTVRMKSDPVFVNIGDTADLLCVADANPITSSMFSWKWMGEGERDELGEESED--DGTGVL 826

  Fly   829 HIKDAKREDVGNFRCVADNRVDNPTNRDILLIVKFAPEIAKTPTLLRAAS-GTGER-GRLPCRAQ 891
            .|.:..|:..|.::|.|||.:....:.:..|||:|||::.|.|...:.|| |.|.. ..:.|:||
Zfish   827 TIYEVTRDRAGVYQCTADNGISPTGSVEGQLIVRFAPDLQKGPQWRKVASRGDGSNDANVVCQAQ 891

  Fly   892 GSPKPQFIWRQDKKDLPINRTYKYEVEERKIDSLTYESTLIVDKVAPA-DYGAYECVARNELGEA 955
            |.|:.||.|.::...|.:... :|| |..:.....:.|.|.|..|:.| ||..:.|.|.|.:||.
Zfish   892 GVPRVQFRWAKNGFPLDLGNP-RYE-ETTESTGTIHTSILTVINVSAALDYAIFTCTAHNSMGED 954

  Fly   956 VETVRLEITSQPDPPLSLNILNVTHDTVTLAWTPGFDGGLKASYRVRYRMADREQYKYIDGLPNS 1020
            ...::|..|:.||||..|.:|.|...:|||.|.|||||||...:||||:.|....|.|:|..|.:
Zfish   955 SLDIQLLSTNHPDPPSDLKLLRVDQTSVTLEWMPGFDGGLTQIFRVRYQWAGSASYMYVDVFPPT 1019

  Fly  1021 HKL-TIGGLRMNTLYLFSVMSWNELGQSSYLPD-----LARAETKEAPPPSHPASSLGGGPPTTS 1079
            ..: |:.||..:|:|.|||.:.|.:|:|||..:     :..|:.|||          .||..|..
Zfish  1020 ATVYTVTGLNPSTMYNFSVNALNSIGESSYADNNKILMVTTADAKEA----------DGGVSTAD 1074

  Fly  1080 QTPL---GGTSGMLLVGVGAGIVVVLLNVFVIGCCLHKRNEKRLKRGLELMPAELTEDSSNTPNL 1141
            |...   ||....::|.:..|.|:.|||.|:  |.|                             
Zfish  1075 QDSALAGGGLPVYVVVILVVGGVLFLLNPFI--CFL----------------------------- 1108

  Fly  1142 VIIGISLAAFGFLLVNASLVAWFFVHQRRKKVAETTNQPAKTATIEMYAPSSYNDTVTGETLSSV 1206
                              |..|    :||:                         ::.|:| ||:
Zfish  1109 ------------------LARW----KRRR-------------------------SLKGDT-SSI 1125

  Fly  1207 SE--KSESYSNEGSSQPEYIDE--VRKKAASTYLVEGSDMPP----PRYQKDGTLPVIYPNNVVN 1263
            |:  |||...:..||...|...  :...|..|.||:.|..|.    ..|.:.......||....:
Zfish  1126 SQETKSEEQRSTASSSTRYASRELINASAQRTLLVDSSSEPDSSVYESYGRQENPHYYYPTEAYS 1190

  Fly  1264 ACTLPHP--------RHNNGSAAIHMTRDDQMLISKGVY--IPSPSPAPP--------PDGSYY 1309
            .....||        ||.. |...|:..:     .:|:|  :.:.||.||        |..:||
Zfish  1191 PALYAHPEGPEDYDGRHGT-SPFTHVYEE-----VRGMYEDLQACSPLPPAAHIHPQAPFSTYY 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snsNP_001036532.1 Ig 73..170 CDD:472250 41/101 (41%)
Ig strand B 89..93 CDD:409559 1/3 (33%)
Ig strand C 101..105 CDD:409559 3/3 (100%)
Ig strand E 130..138 CDD:409559 4/7 (57%)
Ig strand F 148..153 CDD:409559 2/4 (50%)
Ig 173..279 CDD:472250 27/109 (25%)
Ig strand B 196..200 CDD:409418 0/3 (0%)
Ig strand C 210..214 CDD:409418 1/3 (33%)
Ig strand E 241..245 CDD:409418 0/3 (0%)
Ig strand F 255..260 CDD:409418 2/4 (50%)
Ig strand G 272..275 CDD:409418 0/2 (0%)
Ig_3 285..361 CDD:464046 22/77 (29%)
Ig 377..>457 CDD:472250 30/80 (38%)
Ig strand B 397..401 CDD:409418 1/3 (33%)
Ig strand C 411..415 CDD:409418 1/3 (33%)
Ig strand E 440..444 CDD:409418 2/3 (67%)
Ig 477..560 CDD:472250 34/90 (38%)
Ig strand B 499..504 CDD:409418 1/4 (25%)
Ig strand C 514..518 CDD:409418 2/3 (67%)
Ig strand E 537..541 CDD:409418 1/3 (33%)
Ig strand F 551..556 CDD:409418 3/4 (75%)
Ig 584..666 CDD:472250 21/81 (26%)
Ig strand B 595..599 CDD:409416 0/3 (0%)
Ig strand C 609..613 CDD:409416 1/3 (33%)
Ig strand E 636..642 CDD:409416 1/5 (20%)
Ig strand F 652..657 CDD:409416 2/4 (50%)
Ig strand G 667..670 CDD:409416 0/2 (0%)
Ig 678..767 CDD:472250 20/88 (23%)
Ig strand B 696..700 CDD:409353 0/3 (0%)
Ig strand C 710..714 CDD:409353 1/3 (33%)
Ig strand E 733..737 CDD:409353 1/3 (33%)
Ig strand F 747..752 CDD:409353 1/4 (25%)
Ig_3 772..847 CDD:464046 22/77 (29%)
Ig 881..963 CDD:472250 26/83 (31%)
Ig strand B 885..888 CDD:409353 0/2 (0%)
Ig strand C 897..901 CDD:409353 2/3 (67%)
Ig strand E 929..933 CDD:409353 2/3 (67%)
Ig strand F 943..948 CDD:409353 1/4 (25%)
FN3 967..1051 CDD:238020 40/84 (48%)
nphs1XP_073779348.1 None

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