| Sequence 1: | NP_001036532.1 | Gene: | sns / 44097 | FlyBaseID: | FBgn0024189 | Length: | 1542 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001297770.1 | Gene: | Cadm1 / 54725 | MGIID: | 1889272 | Length: | 474 | Species: | Mus musculus |
| Alignment Length: | 433 | Identity: | 108/433 - (24%) |
|---|---|---|---|
| Similarity: | 168/433 - (38%) | Gaps: | 110/433 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 52 LRLLAVIVLASAPVPSHAQQQKFRTTPHDLQVLEGAEAMMRCEVANVAGAVQWTKDGFALGFSAV 116
Fly 117 IPGFPRYSVLGDRKQGIY--------------------NLRIS--NASINDDADYQCQV--GPAR 157
Fly 158 LNSAIRANAKLTVISPPASIEIKGYSHNSKVEVRENQDLQLKCIVANAKPAAQIVWYRGNVEYKP 222
Fly 223 EKREDTVEESTAKRFTTTSSLKLKPGPDDDYTEYTCQARHKALSPDMPMRATVQLSVLYPPGPPY 287
Fly 288 IEGYSAGETLRRGQTVELMCRSRGGNPPAQLIWYKNGSQIRMAYRTSGRLSENIYTFTAEAGDNK 352
Fly 353 ARFRCEASNVMSQNPLKAEVELSVLFAPTHVTVMGPTEARVGDIVPLTCTTAPSNPPAEIKWMVG 417
Fly 418 GRQVRNATSKTIVSPEGGWTTTSNITAVVEPNKRSLVVICHGL 460 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sns | NP_001036532.1 | Ig | 73..170 | CDD:472250 | 23/120 (19%) |
| Ig strand B | 89..93 | CDD:409559 | 1/3 (33%) | ||
| Ig strand C | 101..105 | CDD:409559 | 1/3 (33%) | ||
| Ig strand E | 130..138 | CDD:409559 | 4/27 (15%) | ||
| Ig strand F | 148..153 | CDD:409559 | 2/4 (50%) | ||
| Ig | 173..279 | CDD:472250 | 31/105 (30%) | ||
| Ig strand B | 196..200 | CDD:409418 | 0/3 (0%) | ||
| Ig strand C | 210..214 | CDD:409418 | 1/3 (33%) | ||
| Ig strand E | 241..245 | CDD:409418 | 2/3 (67%) | ||
| Ig strand F | 255..260 | CDD:409418 | 1/4 (25%) | ||
| Ig strand G | 272..275 | CDD:409418 | 0/2 (0%) | ||
| Ig_3 | 285..361 | CDD:464046 | 18/75 (24%) | ||
| Ig | 377..>457 | CDD:472250 | 16/79 (20%) | ||
| Ig strand B | 397..401 | CDD:409418 | 0/3 (0%) | ||
| Ig strand C | 411..415 | CDD:409418 | 0/3 (0%) | ||
| Ig strand E | 440..444 | CDD:409418 | 0/3 (0%) | ||
| Ig | 477..560 | CDD:472250 | |||
| Ig strand B | 499..504 | CDD:409418 | |||
| Ig strand C | 514..518 | CDD:409418 | |||
| Ig strand E | 537..541 | CDD:409418 | |||
| Ig strand F | 551..556 | CDD:409418 | |||
| Ig | 584..666 | CDD:472250 | |||
| Ig strand B | 595..599 | CDD:409416 | |||
| Ig strand C | 609..613 | CDD:409416 | |||
| Ig strand E | 636..642 | CDD:409416 | |||
| Ig strand F | 652..657 | CDD:409416 | |||
| Ig strand G | 667..670 | CDD:409416 | |||
| Ig | 678..767 | CDD:472250 | |||
| Ig strand B | 696..700 | CDD:409353 | |||
| Ig strand C | 710..714 | CDD:409353 | |||
| Ig strand E | 733..737 | CDD:409353 | |||
| Ig strand F | 747..752 | CDD:409353 | |||
| Ig_3 | 772..847 | CDD:464046 | |||
| Ig | 881..963 | CDD:472250 | |||
| Ig strand B | 885..888 | CDD:409353 | |||
| Ig strand C | 897..901 | CDD:409353 | |||
| Ig strand E | 929..933 | CDD:409353 | |||
| Ig strand F | 943..948 | CDD:409353 | |||
| FN3 | 967..1051 | CDD:238020 | |||
| Cadm1 | NP_001297770.1 | IgV_1_Necl-2 | 50..143 | CDD:409465 | 23/120 (19%) |
| FR1 | 50..68 | CDD:409465 | 6/20 (30%) | ||
| Ig strand A | 50..52 | CDD:409465 | 1/4 (25%) | ||
| Ig strand A' | 53..59 | CDD:409465 | 2/5 (40%) | ||
| Ig strand B | 61..69 | CDD:409465 | 2/7 (29%) | ||
| CDR1 | 69..74 | CDD:409465 | 1/4 (25%) | ||
| FR2 | 75..82 | CDD:409465 | 2/26 (8%) | ||
| Ig strand C | 75..81 | CDD:409465 | 1/25 (4%) | ||
| CDR2 | 83..94 | CDD:409465 | 3/10 (30%) | ||
| Ig strand C' | 85..89 | CDD:409465 | 2/3 (67%) | ||
| Ig strand C' | 91..94 | CDD:409465 | 0/2 (0%) | ||
| FR3 | 95..130 | CDD:409465 | 9/34 (26%) | ||
| Ig strand D | 99..106 | CDD:409465 | 0/6 (0%) | ||
| Ig strand E | 109..115 | CDD:409465 | 2/5 (40%) | ||
| Ig strand F | 122..130 | CDD:409465 | 3/7 (43%) | ||
| CDR3 | 131..134 | CDD:409465 | 0/2 (0%) | ||
| Ig strand G | 134..143 | CDD:409465 | 0/13 (0%) | ||
| FR4 | 136..143 | CDD:409465 | 0/6 (0%) | ||
| IgI_2_Necl-2 | 144..242 | CDD:409466 | 31/107 (29%) | ||
| Ig strand A | 144..147 | CDD:409466 | 0/2 (0%) | ||
| Ig strand A' | 150..154 | CDD:409466 | 1/7 (14%) | ||
| Ig strand B | 163..173 | CDD:409466 | 1/9 (11%) | ||
| Ig strand C | 176..185 | CDD:409466 | 4/8 (50%) | ||
| Ig strand C' | 186..189 | CDD:409466 | 1/2 (50%) | ||
| Ig strand D | 191..198 | CDD:409466 | 3/10 (30%) | ||
| Ig strand E | 201..211 | CDD:409466 | 4/9 (44%) | ||
| Ig strand F | 219..227 | CDD:409466 | 2/7 (29%) | ||
| Ig strand G | 234..241 | CDD:409466 | 0/8 (0%) | ||
| IG_like | 255..333 | CDD:214653 | 20/83 (24%) | ||
| Ig strand B | 266..270 | CDD:409353 | 2/3 (67%) | ||
| Ig strand C | 279..284 | CDD:409353 | 0/4 (0%) | ||
| Ig strand F | 313..318 | CDD:409353 | 2/4 (50%) | ||
| 4.1m | 427..445 | CDD:128590 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||