DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and DBP10

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_010253.2 Gene:DBP10 / 851530 SGDID:S000002189 Length:995 Species:Saccharomyces cerevisiae


Alignment Length:984 Identity:250/984 - (25%)
Similarity:390/984 - (39%) Gaps:286/984 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GTIEDDA-----------EVENLSEDSDAEVE--YQPTKLRHKKVTEFEKGFEFVSSVKEYNQDT 62
            |:.|||.           :.|:.:.|||:|||  |.|..               |..|.||:.|.
Yeast    18 GSEEDDIAFDIANEIALNDSESDANDSDSEVEADYGPND---------------VQDVIEYSSDE 67

  Fly    63 WDDLMKYVKRKARTKTDDKIAARLQKRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKKESKK 127
            .:.:..  |:||..|...|      |:...:.:||...    :::|:||            .:..
Yeast    68 EEGVNN--KKKAENKDIKK------KKNSKKEIAAFPM----LEMSDDE------------NNAS 108

  Fly   128 KKKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVAL 192
            .|.:.| :||:|..|.....:..:...:..||....||:.::..|...|:..|||||..|||:.|
Yeast   109 GKTQTG-DDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLIL 172

  Fly   193 LGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTT 257
            ..|||.|.|.||:|||||::||.:|:|  :..:.|...|.::|.|:|||..|.:.|.|...:.|.
Yeast   173 QSRDIVGMARTGSGKTAAFILPMVEKL--KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTE 235

  Fly   258 IDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFA 322
            :...|..||..::.|..::..|||::||||||.: |:|...:..|.|:|.::.|||||:.:..|.
Yeast   236 LRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFL-HLKVEMNLDLKSVEYVVFDEADRLFEMGFQ 299

  Fly   323 EQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLR----------- 376
            ||:.|::.|...||||:|||||:...:.|.....|..|:.|.::...:|:.||.           
Yeast   300 EQLNELLASLPTTRQTLLFSATLPNSLVDFVKAGLVNPVLVRLDAETKVSENLEMLFLSSKNADR 364

  Fly   377 --------QEFIRI--------------------REDKEGDREPILASLICRTFHDHCM------ 407
                    ||.|:|                    ..|.|.||:....:.....|....|      
Yeast   365 EANLLYILQEIIKIPLATSEQLQKLQNSNNEADSDSDDENDRQKKRRNFKKEKFRKQKMPAANEL 429

  Fly   408 -------VFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAAR 465
                   :||.|:.....:..||...|.....::|.|.|..|...|..|:.....:|:.||||||
Yeast   430 PSEKATILFVPTRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAAR 494

  Fly   466 GLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKE------------RKI---- 514
            |:||..:..|||:.:|.:::.::||||||||||..|.:.|:..|.|            :||    
Yeast   495 GVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKKILLTP 559

  Fly   515 ----VKDIIKNA---ESTIKNRIIPPEII-------------------EKYRNKL---------- 543
                :.|::|..   |...:.:..||::.                   :.|:|.:          
Yeast   560 MYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGLGDLYKNLMSSNFDLQLAK 624

  Fly   544 --------------TSLEPE--------------IQNILDEEQAERQ----LAKTEQQ------- 569
                          ||..||              .||....:..|::    |||.:.:       
Yeast   625 KTAMKAEKLYYRTRTSASPESLKRSKEIISSGWDAQNAFFGKNEEKEKLDFLAKLQNRRNKETVF 689

  Fly   570 ------------LSKTERKLLGQTNERRGWFQTKQQREAEKDRLA-LTTGDEDK-ASGGKGK-GK 619
                        ..|..||.|.....:    .|:::...||:|:| |:...||: ..|..|: |.
Yeast   690 EFTRNPDDEMAVFMKRRRKQLAPIQRK----ATERRELLEKERMAGLSHSIEDEILKGDDGETGY 750

  Fly   620 TAGKRKRPEYGGDGEDGPPVKDLEAKRNKKKKEEPRKKTP---------------EQL------A 663
            |..:....|:    ||...:.:.:...|||||:....|.|               :||      |
Yeast   751 TVSEDALKEF----EDADQLLEAQENENKKKKKPKSFKDPTFFLSHYAPAGDIQDKQLQITNGFA 811

  Fly   664 KERA-----MKEIEKVSL----VRAKMAKLRKR----------------PGKLGAATEVHRSGAS 703
            .:.|     :...:||.:    ...|..|.||:                .|:..||:  .|||..
Yeast   812 NDAAQAAYDLNSDDKVQVHKQTATVKWDKKRKKYVNTQGIDNKKYIIGESGQKIAAS--FRSGRF 874

  Fly   704 DG-------KPKRRGGQ--SAFTNDLTDVSRGGALRLRSEANRHKKMTKIAAKKKASSVKLTNKA 759
            |.       ||.:.|.:  |..:|.|.|.|:|.|...|:...:.|       .|:..:.|:.:|.
Yeast   875 DDWSKARNLKPLKVGSRETSIPSNLLEDPSQGPAANGRTVRGKFK-------HKQMKAPKMPDKH 932

  Fly   760 GKNKFNKGK 768
            ..|.:::.|
Yeast   933 RDNYYSQKK 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 156/574 (27%)
DBP10NP_010253.2 DEADc_DDX54 137..341 CDD:350717 82/206 (40%)
SrmB 138..555 CDD:440279 136/419 (32%)
DBP10CT 820..880 CDD:462373 13/61 (21%)

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