DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and AT1G71370

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_177293.1 Gene:AT1G71370 / 843478 AraportID:AT1G71370 Length:558 Species:Arabidopsis thaliana


Alignment Length:545 Identity:152/545 - (27%)
Similarity:240/545 - (44%) Gaps:116/545 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERL----LYRPL 224
            ||..::.|:...|:...||:||.|||.....:|:...||||:|||.|::||.:|.:    .|.|.
plant    23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPK 87

  Fly   225 NNKAITRVLVLVPTRELGAQVYQVTKQ-LCQFTTIDVGLAIGGLDVKAQEAVL-RQNPDIVIATP 287
            .::.:.  :::.|||||.||:::|.:. :.....::..|.:||.:|:|....| .:..:::|.||
plant    88 PHQVMG--VIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTP 150

  Fly   288 GRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQVKDL 352
            |||.|.:|........::|:||||||||:||..|.:|:..||:...|.|:|.|||||.::.|.||
plant   151 GRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADL 215

  Fly   353 AAVSLDKPIKVF--VNNNQQVAFNLRQEFIRIREDKEGDREPILASLICRTFHDHCMVFVQTKKQ 415
            |...|...::|.  ..:..:.:..|..|:::...|::..:   |..|:....:...:||..|...
plant   216 AKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQ---LVHLLIENKNKKLVVFFMTCAC 277

  Fly   416 AHRLHILLG----LLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVI 476
            .....::|.    |..:.....||.:.|:.|..:|..|.|....||:.||||||||||.|:..|:
plant   278 VDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVV 342

  Fly   477 NFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVK-------------------DIIKNA 522
            .:..|...:.:|||||||||..|.|.::.....||...|:                   |:|...
plant   343 QYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDYVEFMRIRRVPLQERKCSENASDVIPII 407

  Fly   523 ES-TIKNRIIP------------------------------------------PEIIE------- 537
            .| .||:|.:.                                          |.|.|       
plant   408 RSLAIKDRAVLEKGLQAFVSFVRAYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIG 472

  Fly   538 ---------------KYRNKLTSLEPEIQNIL-------DEEQAERQLAKTE----QQLSKTERK 576
                           ||:||....:.: ||:|       .|::.:|:.:..|    ...:..:||
plant   473 IVGFTPVQGITFEDIKYKNKSREKQRQ-QNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRK 536

  Fly   577 LLGQTNERRGWFQTKQQREAEKDRL 601
            |.|:   :|...||.|..|....||
plant   537 LTGR---QRQTIQTAQDEEEMNLRL 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 141/518 (27%)
AT1G71370NP_177293.1 SrmB 15..382 CDD:440279 121/363 (33%)
DUF4217 407..461 CDD:464056 4/53 (8%)

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