DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and AT1G63250

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_176514.1 Gene:AT1G63250 / 842631 AraportID:AT1G63250 Length:798 Species:Arabidopsis thaliana


Alignment Length:662 Identity:170/662 - (25%)
Similarity:283/662 - (42%) Gaps:108/662 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGATKNLDLIGTIEDDAEVENLSEDSDAEVEYQPTKLRHKKVTEFEKGFEFVSSVKEYNQDTWDD 65
            :|..:|..|.|..:......:..||||.|.:                         |.....|.|
plant   222 VGVIRNKGLFGRRKFRKNDSSTEEDSDEEGD-------------------------EGKMIGWMD 261

  Fly    66 LMKYVKRKARTKTDDKIAARLQKRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKKESKKKKK 130
            :.|.....:....|.|:..|:.:                 :::::|| :..|.:...:|...|:|
plant   262 MRKTGSSASLGNHDIKLTKRVNR-----------------NVTDEEL-YPPLDINTVREDLSKRK 308

  Fly   131 KAGEEDEEDEGEKMQFADTVEANEQITS---FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVAL 192
            ......||.:          |.::.|.|   |.:..:|...::|:...|.:..|.:|.:|:...|
plant   309 SVDNVMEEKQ----------EPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECL 363

  Fly   193 LGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRV-----LVLVPTRELGAQVYQVTKQL 252
            .|:|....|.|||||:.|::||.:|.:|....:.|.:.:|     |:|.|||||.:|:....|.|
plant   364 DGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKAL 428

  Fly   253 CQF-TTIDVGLAIGGLDVKAQEAVLRQNP-DIVIATPGRLIDHIKNTPSFT--LDSIEVLILDEA 313
            .:| ..|.|...|||...|..:..|...| .|:|||||||:|||:|....|  |.::::.|:|||
plant   429 LKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEA 493

  Fly   314 DRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVF-------VNNNQQV 371
            |.:||..|...:::||:...:.||::|||||:.::|:.::.:.|.:.....       |..:.:|
plant   494 DLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKV 558

  Fly   372 AFNLRQEFIRIREDKEGDREP-ILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHG 435
                ||..|....:......| :|...|..|.....:||..|......::.||..:.:...|:|.
plant   559 ----RQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHA 619

  Fly   436 NLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRA 500
            ...|..|.....:|||....:|:.:||:|||::...|..||...:|...|.||||:|||.|.|:.
plant   620 RKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKG 684

  Fly   501 GISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAK 565
            |..:.|....||..:.::          :.:|.|.|.         .|::.:|: :.|.::.:||
plant   685 GEGLLLIAPWERYFLDEL----------KDLPLEPIP---------APDLDSIV-KHQVDQSMAK 729

  Fly   566 TEQQLSKTE-RKLLGQTNERRGWFQTKQQREAEKDRLALT-TGDEDKASGGKGKGKTAGKRKRPE 628
            .:..:.:.. ...||..|         ..||..:|:..|. ..:....|.|..|.....:|...:
plant   730 IDTSIKEAAYHAWLGYYN---------SVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVK 785

  Fly   629 YGGDGEDGPPVK 640
            .|..|..|.|::
plant   786 MGLKGISGIPIR 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 130/440 (30%)
AT1G63250NP_176514.1 SrmB 329..737 CDD:440279 128/431 (30%)

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