Protein Alignment Rs1 and CG7878

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_649767.1
• Gene: CG7878 / 40959
• FlyBaseID: FBgn0037549
• Length: 703
• Species: Drosophila melanogaster
• Alignment Length: 606
• Identity: 174/606 - (28%)
• Similarity: 257/606 - (42%)
• Gaps: 111/606 - (18%)

  Fly    47 KG--FEFVSSVKEYNQDTWDDLMKYVKRKARTKTD-DKIAAR------LQKRGGAEAVAAEQSDG 102
            ||  :||..:..|.|:|. .||...:..:|..|.. ...|||      |.|....||........
  Fly   184 KGNSYEFNPTSSESNKDN-GDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEVANLTK 247

  Fly   103 SEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGE------------KMQFADTVEANEQ 155
            |||:           |:||    :..|.......|..|||            :..||:..:..|:
  Fly   248 SEIE-----------RIRE----ENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEE 297

  Fly   156 ITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLL 220
            ||.                :|:..|:|||:...|:.|.|.|:.|.|.||||||.|::||.:....
  Fly   298 ITK----------------MGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTE 346

  Fly   221 YR--PLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIV 283
            |:  |...:....||||.|||||..|:....|:. .|..:......||.:...|.:.|.:..:|:
  Fly   347 YQSTPRGTRGGANVLVLAPTRELALQIEMEVKKY-SFRGMKAVCVYGGGNRNMQISDLERGAEII 410

  Fly   284 IATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQ 348
            |.|||||.|.|. .....:.:|..|:|||||||||..|..|:::::......|||::.|||....
  Fly   411 ICTPGRLNDLIM-ANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPG 474

  Fly   349 VKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLICRTFHDHCMVFVQTK 413
            |:.||...:..||:|.|.:....|.:..::.|::.||.......|.:.:...:..|..::|...|
  Fly   475 VRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRK 539

  Fly   414 KQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINF 478
            .:|..|...|.|.|.....:|||..|..|.:::...|...:.:|:|||||:|||||..:..|||:
  Fly   540 VRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINY 604

  Fly   479 VMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKL 543
            ..|...|.|:||||||.||||.|.|:|....::..:.|::|:
  Fly   605 DFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIE----------------------- 646

  Fly   544 TSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNERRGWFQTKQQREAEKDRLALTTGDE 608
                     ||.|.:.|     ...:|....|:.                 :|.||:.|...|..
  Fly   647 ---------ILQEAEQE-----VPDELHNMARRF-----------------KAMKDKRAAEGGGF 680

  Fly   609 DKASGGKGKGKTAGKRKRPEY 629
            ....|..|.|:..|:|...::
  Fly   681 GGRGGRFGGGRGGGRRNFDQF 701

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	131/421 (31%)
CG7878	NP_649767.1	KH_1	92..152	CDD:459630
		DEAD-like_helicase_N	174..663	CDD:475120	163/549 (30%)